Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 JTBP1-201ENST00000441314 247 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 RNU7-35P-201ENST00000517174 62 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.11□□□□□ -2.07
SHISA3A0PJX4 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHISA3A0PJX4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
SHISA3A0PJX4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
SHISA3A0PJX4 AP000648.3-201ENST00000623539 4507 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
SHISA3A0PJX4 RNU6-170P-201ENST00000362832 104 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 SNORA26.2-201ENST00000390922 122 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 RNU6-602P-201ENST00000411155 105 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 AC245047.7-201ENST00000440265 293 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 AC096720.1-201ENST00000604441 183 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 MIR4251-201ENST00000635819 61 ntBASIC2.1□□□□□ -2.07
SHISA3A0PJX4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHISA3A0PJX4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SHISA3A0PJX4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SHISA3A0PJX4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.09□□□□□ -2.07
SHISA3A0PJX4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHISA3A0PJX4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHISA3A0PJX4 SNORD115-35-201ENST00000365122 82 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 RNY1P7-201ENST00000384743 110 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 MIR513A1-201ENST00000385138 129 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 SNORA11.2-201ENST00000408318 127 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 MIR4319-201ENST00000577285 85 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 MIR4446-201ENST00000578505 67 ntBASIC2.09□□□□□ -2.07
SHISA3A0PJX4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHISA3A0PJX4 RNA5SP48-201ENST00000363969 126 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 RNY4P29-201ENST00000410801 97 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 RNU7-2P-201ENST00000516096 62 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 RNA5SP320-201ENST00000516263 124 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 RNU6-762P-201ENST00000517107 102 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
SHISA3A0PJX4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.08□□□□□ -2.08
SHISA3A0PJX4 MIR3162-201ENST00000581818 82 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 MIR4439-201ENST00000583746 80 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 AC012531.4-201ENST00000616509 177 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 AL512310.12-203ENST00000640543 90 ntBASIC2.08□□□□□ -2.08
SHISA3A0PJX4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHISA3A0PJX4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHISA3A0PJX4 RNU6-859P-201ENST00000362728 107 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 SNORA67.1-201ENST00000364749 141 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 RNU6-342P-201ENST00000384521 104 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 MIR196B-201ENST00000384852 84 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 MRPL35P3-201ENST00000421557 364 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 AL513328.1-201ENST00000446460 224 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 MIR548AO-201ENST00000579992 96 ntBASIC2.07□□□□□ -2.08
SHISA3A0PJX4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHISA3A0PJX4 Z82195.2-201ENST00000612348 18351 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
SHISA3A0PJX4 AC062016.1-201ENST00000355719 319 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNU6-60P-201ENST00000364792 103 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNA5SP259-201ENST00000365541 109 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 SNORD38B-201ENST00000384690 67 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 MIR27B-201ENST00000385129 97 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 SNORD109B-201ENST00000458961 67 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 SNORD109A-201ENST00000459128 67 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNU7-61P-201ENST00000515897 61 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNU6-795P-201ENST00000516323 103 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 AC022254.1-201ENST00000567857 235 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 AL357312.1-201ENST00000603879 298 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 SNORD38B-202ENST00000625943 69 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SHISA3A0PJX4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHISA3A0PJX4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
SHISA3A0PJX4 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 MIR206-201ENST00000384872 86 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 RNU7-41P-201ENST00000515917 61 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 SNORD111.1-201ENST00000516421 86 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 Y_RNA.705-201ENST00000516862 110 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 AC026421.1-201ENST00000519101 163 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.05□□□□□ -2.08
SHISA3A0PJX4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.05□□□□□ -2.08
SHISA3A0PJX4 MIR5194-201ENST00000582634 120 ntBASIC2.05□□□□□ -2.08
SHISA3A0PJX4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
SHISA3A0PJX4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.04□□□□□ -2.08
SHISA3A0PJX4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHISA3A0PJX4 RNU6-820P-201ENST00000384273 107 ntBASIC2.04□□□□□ -2.08
SHISA3A0PJX4 MIR450A2-201ENST00000385022 100 ntBASIC2.04□□□□□ -2.08
SHISA3A0PJX4 RNU6-644P-201ENST00000391155 98 ntBASIC2.04□□□□□ -2.08
SHISA3A0PJX4 RNU6-447P-201ENST00000410293 104 ntBASIC2.04□□□□□ -2.08
SHISA3A0PJX4 RNU6-1118P-201ENST00000410382 104 ntBASIC2.04□□□□□ -2.08
SHISA3A0PJX4 RNU6-1076P-201ENST00000410397 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms