Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 Y_RNA.350-201ENST00000365409 98 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 SNORA79-201ENST00000408376 140 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-994P-201ENST00000410507 111 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 AL035398.1-201ENST00000430869 322 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 MTND3P2-201ENST00000438452 342 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 AL118496.2-201ENST00000448300 230 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-561P-201ENST00000516222 102 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
CMTM3Q96MX0 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 AC062037.2-201ENST00000610137 73 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 U4.1-201ENST00000620349 87 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.23-201ENST00000362496 106 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 SNORD89-201ENST00000390981 114 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 RNU4-43P-201ENST00000410628 137 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.9□□□□□ -2.27
CMTM3Q96MX0 AC090844.1-201ENST00000422019 156 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 MIR4744-201ENST00000581563 82 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 MIR4264-201ENST00000583520 66 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 MIR8055-201ENST00000610739 97 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 AL136317.1-201ENST00000612653 226 ntBASIC0.9□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.269-201ENST00000364685 89 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 SNORA1-201ENST00000384107 130 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.539-201ENST00000384635 107 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 RNU6-913P-201ENST00000390913 95 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 MTND1P19-201ENST00000511780 315 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 AC108729.3-201ENST00000513484 108 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 RNU6-237P-201ENST00000515985 71 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.673-201ENST00000516306 88 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 AC099654.10-201ENST00000640395 161 ntBASIC0.89□□□□□ -2.27
CMTM3Q96MX0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CMTM3Q96MX0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.477-201ENST00000384352 108 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 SNORD77.3-201ENST00000391113 65 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.88□□□□□ -2.27
CMTM3Q96MX0 RNU6-998P-201ENST00000515894 101 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 RNY3P16-201ENST00000516338 101 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 snoU13.31-201ENST00000607291 104 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
CMTM3Q96MX0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CMTM3Q96MX0 HSBP1P2-201ENST00000299671 229 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.542-201ENST00000384641 111 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 SNORD38B-201ENST00000384690 67 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CMTM3Q96MX0 RNU6-205P-201ENST00000390858 107 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 MIR1827-201ENST00000408549 66 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 AC244023.1-201ENST00000426884 112 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.87□□□□□ -2.27
CMTM3Q96MX0 AC242498.1-201ENST00000604134 111 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 AL353621.2-201ENST00000605340 133 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 SNORD114-21-201ENST00000606412 72 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 SNORD38B-202ENST00000625943 69 ntBASIC0.87□□□□□ -2.27
CMTM3Q96MX0 MIR1-1-201ENST00000362147 71 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.7-201ENST00000362352 102 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.121-201ENST00000363309 113 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.327-201ENST00000365201 102 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 RNU6-196P-201ENST00000384315 107 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AL121914.1-201ENST00000450188 156 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 RNU2-11P-201ENST00000459191 187 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AC113410.1-201ENST00000505029 247 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 MIR3128-201ENST00000581957 66 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 MIR4503-201ENST00000582187 83 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 7SK.10-201ENST00000621414 298 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
CMTM3Q96MX0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.193-201ENST00000363979 102 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU6-702P-201ENST00000364982 107 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU6-1292P-201ENST00000383856 107 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU6-578P-201ENST00000390980 103 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU6-493P-201ENST00000391321 108 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.618-201ENST00000410949 107 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.626-201ENST00000411288 95 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 AL138752.1-201ENST00000452964 351 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 RNU4-71P-201ENST00000516258 113 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 MIR3129-201ENST00000581095 76 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 SNORA1.1-201ENST00000364671 133 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 AL078595.1-201ENST00000404458 226 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 Y_RNA.797-201ENST00000515977 94 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 RNU6-1023P-201ENST00000516137 106 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms