Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU6-121P-201ENST00000410525 99 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 RNU7-73P-201ENST00000458743 63 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 AC091959.1-201ENST00000495857 238 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 SNORA18.4-201ENST00000516440 124 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 SNORA40.15-201ENST00000516884 107 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
ITCHQ96J02 MIR4804-201ENST00000581683 73 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 MIR4676-201ENST00000583078 72 ntBASIC0.36□□□□□ -2.35
ITCHQ96J02 MIR18A-201ENST00000362310 71 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 Y_RNA.28-201ENST00000362554 111 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 RNU4-45P-201ENST00000365469 141 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 Y_RNA.394-201ENST00000383942 103 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 RNU6-662P-201ENST00000384253 104 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 Y_RNA.541-201ENST00000384640 113 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 SNORA40.5-201ENST00000391061 128 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 Y_RNA.587-201ENST00000391210 103 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
ITCHQ96J02 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
ITCHQ96J02 MTCO2P24-201ENST00000515611 426 ntBASIC0.35□□□□□ -2.35
ITCHQ96J02 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.35□□□□□ -2.35
ITCHQ96J02 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.35□□□□□ -2.35
ITCHQ96J02 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
ITCHQ96J02 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
ITCHQ96J02 Y_RNA.37-201ENST00000362606 108 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 Y_RNA.380-201ENST00000365663 111 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 SNORD24-201ENST00000383884 75 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 SNORA27-201ENST00000384323 126 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 SNORD38B-201ENST00000384690 67 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 MIR518F-201ENST00000384973 87 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 MIR526A2-201ENST00000390198 65 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU6-938P-201ENST00000411285 103 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU6-693P-201ENST00000516134 107 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU6-126P-201ENST00000516685 103 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU7-53P-201ENST00000516705 60 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 RNU6-988P-201ENST00000519081 107 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 MIR3612-201ENST00000579753 87 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 uc_338.6-201ENST00000613544 171 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 SNORD38B-202ENST00000625943 69 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 Z97988.1-201ENST00000637697 135 ntBASIC0.34□□□□□ -2.36
ITCHQ96J02 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
ITCHQ96J02 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.33□□□□□ -2.36
ITCHQ96J02 snoU2_19.2-201ENST00000363024 80 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 Y_RNA.217-201ENST00000364214 105 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 Y_RNA.509-201ENST00000384506 99 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 Y_RNA.641-201ENST00000459414 105 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 RPS29P24-201ENST00000486345 171 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 SNORA27.4-201ENST00000516650 95 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 AL008718.3-201ENST00000610217 321 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 MIR8055-201ENST00000610739 97 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 Y_RNA.802-201ENST00000614892 130 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
ITCHQ96J02 RNU6-770P-201ENST00000363929 105 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 Y_RNA.280-201ENST00000364765 112 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 Y_RNA.412-201ENST00000384001 104 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 RNU6-474P-201ENST00000384243 107 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 RNU6-35P-201ENST00000384530 107 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 MIR215-201ENST00000384858 110 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 ELOCP20-201ENST00000422460 345 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 MIR18B-201ENST00000454574 71 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 Y_RNA.631-201ENST00000459607 101 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 RNY3P15-201ENST00000516297 97 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 RNU6-365P-201ENST00000517113 106 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 AC100767.1-201ENST00000528178 123 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 MIR5688-201ENST00000580619 83 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 AC006006.1-201ENST00000603082 144 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 snoU18.1-201ENST00000629629 71 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 AC010332.2-201ENST00000613083 1904 ntBASIC0.32□□□□□ -2.36
ITCHQ96J02 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.31□□□□□ -2.36
ITCHQ96J02 Y_RNA.19-201ENST00000362462 99 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 RNU6-888P-201ENST00000363010 101 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 Y_RNA.214-201ENST00000364201 112 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 RNU4-10P-201ENST00000364383 140 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 Y_RNA.276-201ENST00000364732 109 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 SNORD61-201ENST00000384252 73 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 RPL21P38-201ENST00000418090 167 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 SNORD36C-201ENST00000516733 66 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 RNU6-1270P-201ENST00000517128 108 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 AC131281.1-201ENST00000522984 164 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 AL160413.1-201ENST00000622780 310 ntBASIC0.31□□□□□ -2.36
ITCHQ96J02 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ITCHQ96J02 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 SNORA1.1-201ENST00000364671 133 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 MIR588-201ENST00000384900 83 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 RNU6-1165P-201ENST00000410119 107 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
ITCHQ96J02 MTATP6P23-201ENST00000440153 476 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 AL731563.1-201ENST00000442202 214 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 HAR1A.1-201ENST00000459583 118 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
ITCHQ96J02 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms