Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 SNORD30.1-201ENST00000391309 70 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 RNA5SP217-201ENST00000515959 91 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 MIR3922-201ENST00000585192 84 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 AC005786.1-201ENST00000588553 154 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.03□□□□□ -1.92
HPS1Q92902 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.03□□□□□ -1.92
HPS1Q92902 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS1Q92902 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS1Q92902 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
HPS1Q92902 RNY1P13-201ENST00000365030 105 ntBASIC3.02□□□□□ -1.93
HPS1Q92902 RNU6-811P-201ENST00000384069 107 ntBASIC3.02□□□□□ -1.93
HPS1Q92902 SNORD77.2-201ENST00000391045 68 ntBASIC3.02□□□□□ -1.93
HPS1Q92902 SNORD59.2-201ENST00000516873 68 ntBASIC3.02□□□□□ -1.93
HPS1Q92902 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HPS1Q92902 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HPS1Q92902 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HPS1Q92902 RNY1P2-201ENST00000364820 117 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 RNVU1-14-201ENST00000384770 164 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 RNU4-83P-201ENST00000410863 133 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 AC074348.1-201ENST00000426503 132 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 RPL23AP6-201ENST00000446637 472 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 SNRPGP12-201ENST00000449481 213 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 RN7SL594P-201ENST00000470590 287 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 SNORA74D-201ENST00000516404 141 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 RNU6-303P-201ENST00000517091 106 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 AC133485.1-201ENST00000567176 124 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS1Q92902 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HPS1Q92902 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HPS1Q92902 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
HPS1Q92902 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HPS1Q92902 RNU6-1031P-201ENST00000384773 107 ntBASIC3□□□□□ -1.93
HPS1Q92902 RNU6-220P-201ENST00000390919 107 ntBASIC3□□□□□ -1.93
HPS1Q92902 BX510359.1-201ENST00000456973 237 ntBASIC3□□□□□ -1.93
HPS1Q92902 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3□□□□□ -1.93
HPS1Q92902 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
HPS1Q92902 SCARNA20.6-201ENST00000517251 106 ntBASIC3□□□□□ -1.93
HPS1Q92902 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3□□□□□ -1.93
HPS1Q92902 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3□□□□□ -1.93
HPS1Q92902 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3□□□□□ -1.93
HPS1Q92902 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HPS1Q92902 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS1Q92902 SNORA38-201ENST00000363946 132 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 RNU1-33P-201ENST00000364249 162 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 MIR526A1-201ENST00000384897 85 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 RNA5SP292-201ENST00000390974 118 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 Y_RNA.596-201ENST00000410462 109 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 RN7SL499P-201ENST00000481141 276 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 RN7SKP132-201ENST00000516001 208 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 SNORA18.5-201ENST00000516616 101 ntBASIC2.99□□□□□ -1.93
HPS1Q92902 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS1Q92902 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS1Q92902 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HPS1Q92902 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HPS1Q92902 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HPS1Q92902 CD24P4-201ENST00000382840 243 ntBASIC2.98□□□□□ -1.93
HPS1Q92902 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
HPS1Q92902 MIR664A-201ENST00000626086 82 ntBASIC2.98□□□□□ -1.93
HPS1Q92902 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HPS1Q92902 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HPS1Q92902 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
HPS1Q92902 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HPS1Q92902 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
HPS1Q92902 CYP3A52P-201ENST00000563326 91 ntBASIC2.97□□□□□ -1.93
HPS1Q92902 AC090897.1-201ENST00000580909 226 ntBASIC2.97□□□□□ -1.93
HPS1Q92902 SCARNA15.3-201ENST00000626315 122 ntBASIC2.97□□□□□ -1.93
HPS1Q92902 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
HPS1Q92902 AP000648.3-201ENST00000623539 4507 ntBASIC2.97□□□□□ -1.93
HPS1Q92902 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HPS1Q92902 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.97□□□□□ -1.93
HPS1Q92902 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.97□□□□□ -1.93
HPS1Q92902 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HPS1Q92902 RNU6-850P-201ENST00000516934 103 ntBASIC2.96□□□□□ -1.94
HPS1Q92902 SNORA74.3-201ENST00000517108 154 ntBASIC2.96□□□□□ -1.94
HPS1Q92902 MIR4536-1-201ENST00000583537 88 ntBASIC2.96□□□□□ -1.94
HPS1Q92902 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HPS1Q92902 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HPS1Q92902 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HPS1Q92902 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HPS1Q92902 RNU6-208P-201ENST00000362431 107 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 RNU6-571P-201ENST00000384128 107 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 SNORA72.6-201ENST00000384520 129 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 RNU6-1241P-201ENST00000384536 107 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 RNU6-1237P-201ENST00000384777 107 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 RNU6-663P-201ENST00000391105 106 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.95□□□□□ -1.94
HPS1Q92902 AC093423.1-201ENST00000440817 142 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 AC141846.1-201ENST00000568348 142 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 MIR3200-201ENST00000580767 85 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 U4.6-201ENST00000621618 127 ntBASIC2.95□□□□□ -1.94
HPS1Q92902 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
HPS1Q92902 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.95□□□□□ -1.94
HPS1Q92902 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
HPS1Q92902 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 221.3 ms