Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 MIR8054-201ENST00000620877 86 ntBASIC2.67□□□□□ -1.98
TMEM40Q8WWA1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TMEM40Q8WWA1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 HMGN2P39-201ENST00000398005 273 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 RNA5SP270-201ENST00000411361 118 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 SNORA28-201ENST00000606769 126 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.66□□□□□ -1.98
TMEM40Q8WWA1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
TMEM40Q8WWA1 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 AL022718.1-201ENST00000412004 84 ntBASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 MIR548BB-201ENST00000626714 66 ntBASIC2.65□□□□□ -1.99
TMEM40Q8WWA1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.171-201ENST00000363760 102 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RNU6-616P-201ENST00000384353 107 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RN7SKP223-201ENST00000410582 62 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RNU7-45P-201ENST00000459460 63 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TMEM40Q8WWA1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 RNU6-950P-201ENST00000384651 107 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 SNORA80E-201ENST00000384744 137 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 RNU2-40P-201ENST00000410833 196 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 POLR2J4-204ENST00000418424 324 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AL035398.1-201ENST00000430869 322 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AC087499.4-201ENST00000448505 178 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AC026436.1-201ENST00000510537 270 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AC021613.1-201ENST00000623880 111 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.63□□□□□ -1.99
TMEM40Q8WWA1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 SNORD58A-201ENST00000383875 65 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 SNORA27-201ENST00000384323 126 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 AL627390.1-201ENST00000396055 340 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 RNU4-69P-201ENST00000410677 143 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 MIR1270-201ENST00000459320 83 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 RNVU1-2-201ENST00000516326 135 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 AC104984.5-201ENST00000586878 94 ntBASIC2.62□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.94-201ENST00000363068 106 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.96-201ENST00000363092 109 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.377-201ENST00000365644 108 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 SNORA48.1-201ENST00000390879 135 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 HSPE1P9-201ENST00000440046 311 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 AL512310.12-203ENST00000640543 90 ntBASIC2.61□□□□□ -1.99
TMEM40Q8WWA1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 RNU6-509P-201ENST00000363519 107 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.316-201ENST00000365118 111 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 U8.15-201ENST00000390947 134 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 AL034345.1-201ENST00000407768 123 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 RNA5SP425-201ENST00000410336 112 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 RNU2-7P-201ENST00000410794 178 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 SNORA31.10-201ENST00000516482 106 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
TMEM40Q8WWA1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 AC005336.3-201ENST00000623833 2679 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 Y_RNA.247-201ENST00000364500 92 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 RNU6-163P-201ENST00000384396 106 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 MIR520A-201ENST00000384862 85 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 RNU7-113P-201ENST00000459273 62 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 RNU6-998P-201ENST00000515894 101 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 AC103810.7-201ENST00000607821 91 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 MIR376B-201ENST00000614515 100 ntBASIC2.59□□□□□ -1.99
TMEM40Q8WWA1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
TMEM40Q8WWA1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TMEM40Q8WWA1 SNORD116-10-201ENST00000363791 102 ntBASIC2.58□□□□□ -2
TMEM40Q8WWA1 Y_RNA.565-201ENST00000384719 101 ntBASIC2.58□□□□□ -2
TMEM40Q8WWA1 RNA5SP501-201ENST00000410990 112 ntBASIC2.58□□□□□ -2
TMEM40Q8WWA1 AC114811.1-201ENST00000507207 168 ntBASIC2.58□□□□□ -2
TMEM40Q8WWA1 MIR548AE2-201ENST00000583456 67 ntBASIC2.58□□□□□ -2
TMEM40Q8WWA1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms