Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 MIR2115-201ENST00000516657 100 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 AP003484.1-201ENST00000530974 250 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 AL442067.1-201ENST00000613261 223 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 AC134878.1-201ENST00000619901 243 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 7SK.10-201ENST00000621414 298 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-34-201ENST00000362441 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-12-201ENST00000362583 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-29-201ENST00000362834 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-9-201ENST00000362912 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-21-201ENST00000362963 81 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-888P-201ENST00000363010 101 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-653P-201ENST00000363074 106 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-14-201ENST00000363090 81 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-13-201ENST00000363358 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.133-201ENST00000363428 110 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-41-201ENST00000363608 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-11-201ENST00000363616 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-5-201ENST00000363633 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-39-201ENST00000363694 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-4-201ENST00000363810 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-16-201ENST00000363887 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-6-201ENST00000363942 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD27-201ENST00000363981 72 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-42-201ENST00000364273 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD113.3-201ENST00000364630 78 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-15-201ENST00000364809 81 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.292-201ENST00000364904 97 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-1-201ENST00000364961 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-26-201ENST00000365067 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-10-201ENST00000365073 81 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-43-201ENST00000365503 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU4-17P-201ENST00000365598 141 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-36-201ENST00000365629 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNY3P5-201ENST00000384127 102 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-42P-201ENST00000384165 107 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-205P-201ENST00000390858 107 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA40.5-201ENST00000391061 128 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 MIR548H3-201ENST00000408771 118 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 AF228730.3-201ENST00000436691 102 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 AL118496.2-201ENST00000448300 230 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 AC067940.1-201ENST00000458411 300 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 snoU13.16-201ENST00000459350 104 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-1045P-201ENST00000516321 107 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNY3P16-201ENST00000516338 101 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA18.4-201ENST00000516440 124 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-113P-201ENST00000516653 101 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD36C-201ENST00000516733 66 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD115-40-201ENST00000606510 82 ntBASIC0.64□□□□□ -2.31
CCDC71LQ8N9Z2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.65-201ENST00000362846 100 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD45.3-201ENST00000363836 72 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA27-201ENST00000384323 126 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-381P-201ENST00000391259 108 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 AL138752.1-201ENST00000452964 351 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-561P-201ENST00000516222 102 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 AP000942.4-201ENST00000604811 241 ntBASIC0.63□□□□□ -2.31
CCDC71LQ8N9Z2 MIR342-201ENST00000362212 99 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.7-201ENST00000362352 102 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD114-22-201ENST00000365423 72 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA24-201ENST00000384096 131 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 RNA5SP153-201ENST00000516498 76 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-728P-201ENST00000365375 104 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.556-201ENST00000384677 113 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-913P-201ENST00000390913 95 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA79-201ENST00000408376 140 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 AC090844.1-201ENST00000422019 156 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 RPS29P24-201ENST00000486345 171 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA4-201ENST00000584302 138 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 MIR4719-201ENST00000585233 84 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 AC011921.3-201ENST00000605540 361 ntBASIC0.61□□□□□ -2.31
CCDC71LQ8N9Z2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-1189P-201ENST00000383958 107 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 SNORA1-201ENST00000384107 130 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.562-201ENST00000384695 113 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-493P-201ENST00000391321 108 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms