Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC087499.4-201ENST00000448505 178 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 SNORD111.1-201ENST00000516421 86 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 RNU2-60P-201ENST00000517290 128 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 AL365205.2-201ENST00000594586 68 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 snoU13.31-201ENST00000607291 104 ntBASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNPOQ8N3V7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 U8.1-201ENST00000362843 134 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 SNORD77.3-201ENST00000391113 65 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 MIR934-201ENST00000401241 83 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.629-201ENST00000411368 105 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 RNU6-659P-201ENST00000516454 104 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 AC131055.1-201ENST00000584626 316 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 AL357312.1-201ENST00000603879 298 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.95□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 SNORD41-201ENST00000386967 70 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 RNU1-78P-201ENST00000391248 165 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 AC027119.1-201ENST00000440877 241 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 RPL39P39-201ENST00000455840 151 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 RNU7-70P-201ENST00000516941 66 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 MIR4764-201ENST00000580680 88 ntBASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SYNPOQ8N3V7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 MIR624-201ENST00000385217 97 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 RNU7-107P-201ENST00000459121 61 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 RNU7-43P-201ENST00000516554 64 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 MIR4255-201ENST00000579351 72 ntBASIC1.93□□□□□ -2.1
SYNPOQ8N3V7 MIR378A-201ENST00000362177 66 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.273-201ENST00000364703 102 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 SNORA27-201ENST00000384323 126 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.525-201ENST00000384570 113 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 RNA5SP445-201ENST00000515889 115 ntBASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNPOQ8N3V7 RNU6-508P-201ENST00000363231 103 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 SNORA40.5-201ENST00000391061 128 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 AL121890.5-201ENST00000620848 304 ntBASIC1.91□□□□□ -2.1
SYNPOQ8N3V7 MIR337-201ENST00000362281 93 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RNU6-235P-201ENST00000362644 107 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.353-201ENST00000365440 108 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 SNORA51.10-201ENST00000384418 136 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 SNORA17.3-201ENST00000391159 129 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 AL603914.1-201ENST00000401964 204 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RPS27P16-201ENST00000425758 201 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RPL30P7-201ENST00000479312 323 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RN7SKP88-201ENST00000516847 250 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 RNU6-958P-201ENST00000516995 106 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.712-201ENST00000517011 92 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 MIR3121-201ENST00000579680 77 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 MIR4781-201ENST00000585250 76 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 AL359881.1-201ENST00000602916 267 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 7SK.8-201ENST00000612110 250 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 7SK.11-201ENST00000615477 250 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 7SK.13-201ENST00000622040 250 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-34-201ENST00000362441 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-12-201ENST00000362583 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-29-201ENST00000362834 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-9-201ENST00000362912 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-21-201ENST00000362963 81 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-14-201ENST00000363090 81 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-13-201ENST00000363358 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-41-201ENST00000363608 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-11-201ENST00000363616 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-5-201ENST00000363633 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-39-201ENST00000363694 82 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms