Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR548Z-201ENST00000584743 97 ntBASIC2.58□□□□□ -2
SOX4Q06945 U7.3-201ENST00000616123 62 ntBASIC2.58□□□□□ -2
SOX4Q06945 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
SOX4Q06945 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
SOX4Q06945 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SOX4Q06945 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SOX4Q06945 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
SOX4Q06945 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SOX4Q06945 RNU6-616P-201ENST00000384353 107 ntBASIC2.57□□□□□ -2
SOX4Q06945 SNORA18-201ENST00000384416 132 ntBASIC2.57□□□□□ -2
SOX4Q06945 RNU1-148P-201ENST00000384472 162 ntBASIC2.57□□□□□ -2
SOX4Q06945 MIR136-201ENST00000385207 82 ntBASIC2.57□□□□□ -2
SOX4Q06945 AC093850.1-201ENST00000454121 251 ntBASIC2.57□□□□□ -2
SOX4Q06945 RNU7-53P-201ENST00000516705 60 ntBASIC2.57□□□□□ -2
SOX4Q06945 MIR548AE2-201ENST00000583456 67 ntBASIC2.57□□□□□ -2
SOX4Q06945 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
SOX4Q06945 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.57□□□□□ -2
SOX4Q06945 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SOX4Q06945 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
SOX4Q06945 Y_RNA.219-201ENST00000364232 113 ntBASIC2.56□□□□□ -2
SOX4Q06945 SNORD78.1-201ENST00000390866 65 ntBASIC2.56□□□□□ -2
SOX4Q06945 SNORD77B-201ENST00000391112 67 ntBASIC2.56□□□□□ -2
SOX4Q06945 Z98742.3-201ENST00000418637 326 ntBASIC2.56□□□□□ -2
SOX4Q06945 RPS29P29-201ENST00000456396 171 ntBASIC2.56□□□□□ -2
SOX4Q06945 MIR6841-201ENST00000637129 72 ntBASIC2.56□□□□□ -2
SOX4Q06945 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
SOX4Q06945 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
SOX4Q06945 RNU6-60P-201ENST00000364792 103 ntBASIC2.55□□□□□ -2
SOX4Q06945 SNORA26.6-201ENST00000391256 115 ntBASIC2.55□□□□□ -2
SOX4Q06945 RNA5SP261-201ENST00000410536 106 ntBASIC2.55□□□□□ -2
SOX4Q06945 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
SOX4Q06945 RNU2-13P-201ENST00000515909 113 ntBASIC2.55□□□□□ -2
SOX4Q06945 SCARNA16.3-201ENST00000516595 184 ntBASIC2.55□□□□□ -2
SOX4Q06945 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
SOX4Q06945 DNAJC19P9-201ENST00000555084 351 ntBASIC2.55□□□□□ -2
SOX4Q06945 MIR4777-201ENST00000583710 86 ntBASIC2.55□□□□□ -2
SOX4Q06945 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
SOX4Q06945 AC091304.10-201ENST00000641554 121 ntBASIC2.55□□□□□ -2
SOX4Q06945 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOX4Q06945 SNORA38-201ENST00000363946 132 ntBASIC2.54□□□□□ -2
SOX4Q06945 SNORD45B-201ENST00000364617 72 ntBASIC2.54□□□□□ -2
SOX4Q06945 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.54□□□□□ -2
SOX4Q06945 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
SOX4Q06945 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
SOX4Q06945 AC109327.2-201ENST00000448339 378 ntBASIC2.54□□□□□ -2
SOX4Q06945 RNU7-26P-201ENST00000458980 63 ntBASIC2.54□□□□□ -2
SOX4Q06945 MIR1270-201ENST00000459320 83 ntBASIC2.54□□□□□ -2
SOX4Q06945 RNVU1-2-201ENST00000516326 135 ntBASIC2.54□□□□□ -2
SOX4Q06945 RNU6-1018P-201ENST00000516577 106 ntBASIC2.54□□□□□ -2
SOX4Q06945 RNU6-521P-201ENST00000516663 105 ntBASIC2.54□□□□□ -2
SOX4Q06945 RNA5SP137-201ENST00000516833 135 ntBASIC2.54□□□□□ -2
SOX4Q06945 MIR548AR-201ENST00000582191 57 ntBASIC2.54□□□□□ -2
SOX4Q06945 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
SOX4Q06945 MIR4791-201ENST00000607666 84 ntBASIC2.54□□□□□ -2
SOX4Q06945 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
SOX4Q06945 IGLL4P-201ENST00000614590 133 ntBASIC2.54□□□□□ -2
SOX4Q06945 MIR6717-201ENST00000622747 73 ntBASIC2.54□□□□□ -2
SOX4Q06945 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
SOX4Q06945 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
SOX4Q06945 RNY1P1-201ENST00000364372 112 ntBASIC2.53□□□□□ -2
SOX4Q06945 Y_RNA.377-201ENST00000365644 108 ntBASIC2.53□□□□□ -2
SOX4Q06945 SNORA24-201ENST00000384096 131 ntBASIC2.53□□□□□ -2
SOX4Q06945 RNU6-1201P-201ENST00000384227 107 ntBASIC2.53□□□□□ -2
SOX4Q06945 AL451046.2-201ENST00000403074 277 ntBASIC2.53□□□□□ -2
SOX4Q06945 MIR1283-2-201ENST00000408621 87 ntBASIC2.53□□□□□ -2
SOX4Q06945 RNU2-7P-201ENST00000410794 178 ntBASIC2.53□□□□□ -2
SOX4Q06945 RNU6-1190P-201ENST00000410811 104 ntBASIC2.53□□□□□ -2
SOX4Q06945 MRPL35P3-201ENST00000421557 364 ntBASIC2.53□□□□□ -2
SOX4Q06945 RNU7-34P-201ENST00000459394 64 ntBASIC2.53□□□□□ -2
SOX4Q06945 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
SOX4Q06945 Y_RNA.430-201ENST00000384081 110 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 RNU6-913P-201ENST00000390913 95 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 SNORD28B-201ENST00000390993 75 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 BTF3P4-201ENST00000418852 495 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 Y_RNA.659-201ENST00000515994 113 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 AC243994.1-201ENST00000618627 109 ntBASIC2.52□□□□□ -2.01
SOX4Q06945 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.52□□□□□ -2.01
SOX4Q06945 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SOX4Q06945 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SOX4Q06945 Y_RNA.95-201ENST00000363079 95 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 Y_RNA.96-201ENST00000363092 109 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 SNORA70B-201ENST00000384210 135 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 RN7SKP223-201ENST00000410582 62 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 RNU7-73P-201ENST00000458743 63 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 SNORD123-201ENST00000459473 70 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 AC022137.1-201ENST00000483735 151 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 AL020996.3-201ENST00000606617 222 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 AL512310.12-203ENST00000640543 90 ntBASIC2.51□□□□□ -2.01
SOX4Q06945 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SOX4Q06945 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SOX4Q06945 Y_RNA.190-201ENST00000363964 101 ntBASIC2.5□□□□□ -2.01
SOX4Q06945 SNORA32-201ENST00000384072 121 ntBASIC2.5□□□□□ -2.01
SOX4Q06945 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
SOX4Q06945 RNA5SP437-201ENST00000517249 129 ntBASIC2.5□□□□□ -2.01
SOX4Q06945 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
SOX4Q06945 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.5□□□□□ -2.01
SOX4Q06945 AC021506.2-201ENST00000612354 169 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms