Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU6-457P-201ENST00000363999 107 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 Y_RNA.241-201ENST00000364470 117 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 SNORA27-201ENST00000384323 126 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 MIR194-1-201ENST00000384892 85 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 RNA5SP212-201ENST00000391223 107 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 AL627390.1-201ENST00000396055 340 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 MIR1263-201ENST00000408324 86 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 AC090821.2-201ENST00000523552 176 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 HSPE1P19-201ENST00000603327 295 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 Y_RNA.783-201ENST00000613546 102 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 AC095038.3-201ENST00000634439 195 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 MTND5P18-201ENST00000445624 1801 ntBASIC1.44□□□□□ -2.18
ERVFC1-1P60608 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ERVFC1-1P60608 SNORD115-34-201ENST00000362441 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-12-201ENST00000362583 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-29-201ENST00000362834 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-9-201ENST00000362912 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-21-201ENST00000362963 81 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-14-201ENST00000363090 81 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-13-201ENST00000363358 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-41-201ENST00000363608 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-11-201ENST00000363616 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-5-201ENST00000363633 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-39-201ENST00000363694 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-4-201ENST00000363810 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-16-201ENST00000363887 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-6-201ENST00000363942 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-42-201ENST00000364273 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-15-201ENST00000364809 81 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNU1-133P-201ENST00000364867 167 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-1-201ENST00000364961 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-26-201ENST00000365067 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-10-201ENST00000365073 81 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-43-201ENST00000365503 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-36-201ENST00000365629 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNY1P6-201ENST00000384193 109 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 MIR136-201ENST00000385207 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD28B-201ENST00000390993 75 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNY4P18-201ENST00000391107 89 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AC019129.1-201ENST00000403786 261 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 MIR1267-201ENST00000408723 78 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.43□□□□□ -2.18
ERVFC1-1P60608 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.43□□□□□ -2.18
ERVFC1-1P60608 snoU13.23-201ENST00000458863 104 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNU6-998P-201ENST00000515894 101 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNU6-237P-201ENST00000515985 71 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 RNU6-589P-201ENST00000516485 107 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.43□□□□□ -2.18
ERVFC1-1P60608 MIR3618-201ENST00000580330 88 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AL670379.3-201ENST00000605040 251 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 SNORD115-40-201ENST00000606510 82 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.43□□□□□ -2.18
ERVFC1-1P60608 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
ERVFC1-1P60608 AL596211.1-201ENST00000569873 2277 ntBASIC1.43□□□□□ -2.18
ERVFC1-1P60608 MIR342-201ENST00000362212 99 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNU6-690P-201ENST00000365242 106 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 Y_RNA.346-201ENST00000365385 112 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 Y_RNA.528-201ENST00000384575 108 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 SNORA64-201ENST00000384674 134 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 SNX2P2-201ENST00000424553 323 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNU7-80P-201ENST00000459562 61 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RPS29P24-201ENST00000486345 171 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNU7-70P-201ENST00000516941 66 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 RNU6-548P-201ENST00000517083 115 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 AC022254.1-201ENST00000567857 235 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 MIR4419B-201ENST00000577260 68 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 MIR548AR-201ENST00000582191 57 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 AC103810.8-201ENST00000607347 118 ntBASIC1.42□□□□□ -2.18
ERVFC1-1P60608 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNU6-1123P-201ENST00000362347 106 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 MIR548A3-201ENST00000385297 97 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNU7-96P-201ENST00000459535 64 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNU2-13P-201ENST00000515909 113 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNU6-917P-201ENST00000516294 104 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNY4P20-201ENST00000516678 93 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 Y_RNA.709-201ENST00000516952 92 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 SUMO2P16-201ENST00000519475 264 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 MIR4713-201ENST00000582691 75 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 AC106754.2-201ENST00000623006 233 ntBASIC1.41□□□□□ -2.18
ERVFC1-1P60608 RNA5SP432-201ENST00000362480 116 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.35-201ENST00000362601 101 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 RNU4-16P-201ENST00000364737 141 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.370-201ENST00000365589 108 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.454-201ENST00000384224 113 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 MIR583-201ENST00000384846 75 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 MIR548A1-201ENST00000385041 97 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 MT-TI-201ENST00000387365 69 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 RNA5SP136-201ENST00000410906 107 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 AC004965.1-201ENST00000413033 213 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.649-201ENST00000459077 103 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 MIR4769-201ENST00000584126 77 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms