Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU6-847P-201ENST00000411115 108 ntBASIC1□□□□□ -2.25
CDH3P22223 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
CDH3P22223 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
CDH3P22223 AF228730.3-201ENST00000436691 102 ntBASIC1□□□□□ -2.25
CDH3P22223 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
CDH3P22223 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
CDH3P22223 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
CDH3P22223 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1□□□□□ -2.25
CDH3P22223 MIR4744-201ENST00000581563 82 ntBASIC1□□□□□ -2.25
CDH3P22223 RNU2-4P-201ENST00000606190 192 ntBASIC1□□□□□ -2.25
CDH3P22223 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
CDH3P22223 MTND1P7-201ENST00000632801 297 ntBASIC1□□□□□ -2.25
CDH3P22223 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
CDH3P22223 Y_RNA.7-201ENST00000362352 102 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-34-201ENST00000362441 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-12-201ENST00000362583 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-29-201ENST00000362834 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-9-201ENST00000362912 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-21-201ENST00000362963 81 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-14-201ENST00000363090 81 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-13-201ENST00000363358 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-41-201ENST00000363608 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-11-201ENST00000363616 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-5-201ENST00000363633 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-39-201ENST00000363694 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-4-201ENST00000363810 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-16-201ENST00000363887 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-6-201ENST00000363942 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-42-201ENST00000364273 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-15-201ENST00000364809 81 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-1-201ENST00000364961 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-26-201ENST00000365067 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-10-201ENST00000365073 81 ntBASIC0.99□□□□□ -2.25
CDH3P22223 RNU6-728P-201ENST00000365375 104 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-43-201ENST00000365503 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-36-201ENST00000365629 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORA24-201ENST00000384096 131 ntBASIC0.99□□□□□ -2.25
CDH3P22223 RNU6-1067P-201ENST00000384752 107 ntBASIC0.99□□□□□ -2.25
CDH3P22223 RNU4-43P-201ENST00000410628 137 ntBASIC0.99□□□□□ -2.25
CDH3P22223 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH3P22223 SNORA18.4-201ENST00000516440 124 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD36C-201ENST00000516733 66 ntBASIC0.99□□□□□ -2.25
CDH3P22223 MIR548AO-201ENST00000579992 96 ntBASIC0.99□□□□□ -2.25
CDH3P22223 AP000942.4-201ENST00000604811 241 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SNORD115-40-201ENST00000606510 82 ntBASIC0.99□□□□□ -2.25
CDH3P22223 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
CDH3P22223 SEPT14P17-201ENST00000617978 177 ntBASIC0.99□□□□□ -2.25
CDH3P22223 AC243994.1-201ENST00000618627 109 ntBASIC0.99□□□□□ -2.25
CDH3P22223 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
CDH3P22223 Y_RNA.224-201ENST00000364308 111 ntBASIC0.98□□□□□ -2.25
CDH3P22223 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
CDH3P22223 RNU6-578P-201ENST00000390980 103 ntBASIC0.98□□□□□ -2.25
CDH3P22223 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CDH3P22223 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
CDH3P22223 AC009779.6-201ENST00000603972 165 ntBASIC0.98□□□□□ -2.25
CDH3P22223 AC134878.1-201ENST00000619901 243 ntBASIC0.98□□□□□ -2.25
CDH3P22223 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDH3P22223 Y_RNA.121-201ENST00000363309 113 ntBASIC0.97□□□□□ -2.25
CDH3P22223 SNORA1-201ENST00000384107 130 ntBASIC0.97□□□□□ -2.25
CDH3P22223 Y_RNA.571-201ENST00000384753 98 ntBASIC0.97□□□□□ -2.25
CDH3P22223 SNORA40.5-201ENST00000391061 128 ntBASIC0.97□□□□□ -2.25
CDH3P22223 RNU7-90P-201ENST00000459216 62 ntBASIC0.97□□□□□ -2.25
CDH3P22223 RNU11-2P-201ENST00000516898 142 ntBASIC0.97□□□□□ -2.25
CDH3P22223 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
CDH3P22223 AL078603.1-201ENST00000603824 313 ntBASIC0.97□□□□□ -2.25
CDH3P22223 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
CDH3P22223 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
CDH3P22223 MIR411-201ENST00000362239 96 ntBASIC0.96□□□□□ -2.26
CDH3P22223 Y_RNA.200-201ENST00000364018 102 ntBASIC0.96□□□□□ -2.26
CDH3P22223 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
CDH3P22223 Y_RNA.330-201ENST00000365230 109 ntBASIC0.96□□□□□ -2.26
CDH3P22223 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
CDH3P22223 Y_RNA.489-201ENST00000384410 101 ntBASIC0.96□□□□□ -2.26
CDH3P22223 RNU6-918P-201ENST00000391219 106 ntBASIC0.96□□□□□ -2.26
CDH3P22223 AL121914.1-201ENST00000450188 156 ntBASIC0.96□□□□□ -2.26
CDH3P22223 MIR376A2-201ENST00000636782 80 ntBASIC0.96□□□□□ -2.26
CDH3P22223 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH3P22223 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CDH3P22223 Y_RNA.188-201ENST00000363952 111 ntBASIC0.95□□□□□ -2.26
CDH3P22223 RNU6-654P-201ENST00000364373 107 ntBASIC0.95□□□□□ -2.26
CDH3P22223 Y_RNA.401-201ENST00000383965 117 ntBASIC0.95□□□□□ -2.26
CDH3P22223 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
CDH3P22223 SNORD77.3-201ENST00000391113 65 ntBASIC0.95□□□□□ -2.26
CDH3P22223 Y_RNA.618-201ENST00000410949 107 ntBASIC0.95□□□□□ -2.26
CDH3P22223 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
CDH3P22223 AC107297.1-201ENST00000459991 176 ntBASIC0.95□□□□□ -2.26
CDH3P22223 Y_RNA.797-201ENST00000515977 94 ntBASIC0.95□□□□□ -2.26
CDH3P22223 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
CDH3P22223 AC130289.1-201ENST00000577321 73 ntBASIC0.95□□□□□ -2.26
CDH3P22223 Y_RNA.182-201ENST00000363880 111 ntBASIC0.94□□□□□ -2.26
CDH3P22223 RNU6-978P-201ENST00000364371 103 ntBASIC0.94□□□□□ -2.26
CDH3P22223 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
CDH3P22223 RNU6-47P-201ENST00000383866 107 ntBASIC0.94□□□□□ -2.26
CDH3P22223 Y_RNA.410-201ENST00000383992 113 ntBASIC0.94□□□□□ -2.26
CDH3P22223 SNORA79-201ENST00000408376 140 ntBASIC0.94□□□□□ -2.26
CDH3P22223 RPS29P24-201ENST00000486345 171 ntBASIC0.94□□□□□ -2.26
CDH3P22223 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.94□□□□□ -2.26
CDH3P22223 RNU6-1271P-201ENST00000517049 105 ntBASIC0.94□□□□□ -2.26
CDH3P22223 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.94□□□□□ -2.26
CDH3P22223 MIR3129-201ENST00000581095 76 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms