Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 7SK.13-201ENST00000622040 250 ntBASIC1.97□□□□□ -2.09
ATF4P18848 Y_RNA.218-201ENST00000364218 104 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RNU4-16P-201ENST00000364737 141 ntBASIC1.96□□□□□ -2.1
ATF4P18848 Y_RNA.280-201ENST00000364765 112 ntBASIC1.96□□□□□ -2.1
ATF4P18848 SNORD116-14-201ENST00000383894 92 ntBASIC1.96□□□□□ -2.1
ATF4P18848 SNORD116-17-201ENST00000383929 92 ntBASIC1.96□□□□□ -2.1
ATF4P18848 SNORD116-15-201ENST00000384445 92 ntBASIC1.96□□□□□ -2.1
ATF4P18848 SNORD116-19-201ENST00000384729 92 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RNU6-913P-201ENST00000390913 95 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RPS27P16-201ENST00000425758 201 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RN7SKP19-201ENST00000516016 252 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RNU6-1061P-201ENST00000516530 99 ntBASIC1.96□□□□□ -2.1
ATF4P18848 CYP3A52P-201ENST00000563326 91 ntBASIC1.96□□□□□ -2.1
ATF4P18848 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.96□□□□□ -2.1
ATF4P18848 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
ATF4P18848 MIR3683-201ENST00000580847 82 ntBASIC1.96□□□□□ -2.1
ATF4P18848 MIR3945-201ENST00000581853 98 ntBASIC1.96□□□□□ -2.1
ATF4P18848 RNU4-82P-201ENST00000362443 140 ntBASIC1.95□□□□□ -2.1
ATF4P18848 Y_RNA.127-201ENST00000363386 109 ntBASIC1.95□□□□□ -2.1
ATF4P18848 Y_RNA.354-201ENST00000365448 111 ntBASIC1.95□□□□□ -2.1
ATF4P18848 Y_RNA.366-201ENST00000365540 102 ntBASIC1.95□□□□□ -2.1
ATF4P18848 RNU6-22P-201ENST00000384355 107 ntBASIC1.95□□□□□ -2.1
ATF4P18848 RPS3AP1-201ENST00000413190 320 ntBASIC1.95□□□□□ -2.1
ATF4P18848 AC009474.2-201ENST00000451383 136 ntBASIC1.95□□□□□ -2.1
ATF4P18848 AC079600.2-201ENST00000550076 130 ntBASIC1.95□□□□□ -2.1
ATF4P18848 AC067747.1-201ENST00000608026 250 ntBASIC1.95□□□□□ -2.1
ATF4P18848 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.95□□□□□ -2.1
ATF4P18848 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ATF4P18848 MIR21-201ENST00000362134 72 ntBASIC1.94□□□□□ -2.1
ATF4P18848 RNA5SP126-201ENST00000365092 109 ntBASIC1.94□□□□□ -2.1
ATF4P18848 RNU6-1081P-201ENST00000384537 107 ntBASIC1.94□□□□□ -2.1
ATF4P18848 AL022718.1-201ENST00000412004 84 ntBASIC1.94□□□□□ -2.1
ATF4P18848 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.94□□□□□ -2.1
ATF4P18848 AC108938.1-201ENST00000451204 136 ntBASIC1.94□□□□□ -2.1
ATF4P18848 RNU7-45P-201ENST00000459460 63 ntBASIC1.94□□□□□ -2.1
ATF4P18848 MIR548AO-201ENST00000579992 96 ntBASIC1.94□□□□□ -2.1
ATF4P18848 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
ATF4P18848 MIR4305-201ENST00000583252 102 ntBASIC1.94□□□□□ -2.1
ATF4P18848 HSPE1P19-201ENST00000603327 295 ntBASIC1.94□□□□□ -2.1
ATF4P18848 AC108081.1-201ENST00000604358 221 ntBASIC1.94□□□□□ -2.1
ATF4P18848 MIR8055-201ENST00000610739 97 ntBASIC1.94□□□□□ -2.1
ATF4P18848 MIR6717-201ENST00000622747 73 ntBASIC1.94□□□□□ -2.1
ATF4P18848 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ATF4P18848 SNORD114-30-201ENST00000364448 72 ntBASIC1.93□□□□□ -2.1
ATF4P18848 RNU6-1333P-201ENST00000516162 93 ntBASIC1.93□□□□□ -2.1
ATF4P18848 RNU6-313P-201ENST00000516317 112 ntBASIC1.93□□□□□ -2.1
ATF4P18848 RNU6-479P-201ENST00000516348 105 ntBASIC1.93□□□□□ -2.1
ATF4P18848 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ATF4P18848 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
ATF4P18848 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ATF4P18848 RNA5SP68-201ENST00000363885 119 ntBASIC1.92□□□□□ -2.1
ATF4P18848 Y_RNA.430-201ENST00000384081 110 ntBASIC1.92□□□□□ -2.1
ATF4P18848 RNA5SP136-201ENST00000410906 107 ntBASIC1.92□□□□□ -2.1
ATF4P18848 Y_RNA.617-201ENST00000410920 90 ntBASIC1.92□□□□□ -2.1
ATF4P18848 AC245047.7-201ENST00000440265 293 ntBASIC1.92□□□□□ -2.1
ATF4P18848 RNU7-164P-201ENST00000459221 62 ntBASIC1.92□□□□□ -2.1
ATF4P18848 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
ATF4P18848 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
ATF4P18848 MIR548AI-201ENST00000579940 88 ntBASIC1.92□□□□□ -2.1
ATF4P18848 MIR6817-201ENST00000615588 66 ntBASIC1.92□□□□□ -2.1
ATF4P18848 AL590808.1-201ENST00000618696 141 ntBASIC1.92□□□□□ -2.1
ATF4P18848 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ATF4P18848 SNORA67.4-201ENST00000384688 142 ntBASIC1.91□□□□□ -2.1
ATF4P18848 SNORD38B-201ENST00000384690 67 ntBASIC1.91□□□□□ -2.1
ATF4P18848 RNU6-1154P-201ENST00000391001 104 ntBASIC1.91□□□□□ -2.1
ATF4P18848 SNORA31.4-201ENST00000516049 129 ntBASIC1.91□□□□□ -2.1
ATF4P18848 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
ATF4P18848 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
ATF4P18848 U4.3-201ENST00000621047 82 ntBASIC1.91□□□□□ -2.1
ATF4P18848 SNORD38B-202ENST00000625943 69 ntBASIC1.91□□□□□ -2.1
ATF4P18848 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
ATF4P18848 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.91□□□□□ -2.1
ATF4P18848 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATF4P18848 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATF4P18848 AL161722.3-201ENST00000605789 2983 ntBASIC1.91□□□□□ -2.1
ATF4P18848 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ATF4P18848 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.1
ATF4P18848 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
ATF4P18848 SNORA22.1-201ENST00000362701 134 ntBASIC1.9□□□□□ -2.11
ATF4P18848 SNORA25.3-201ENST00000363205 127 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU6-396P-201ENST00000365369 105 ntBASIC1.9□□□□□ -2.11
ATF4P18848 MIR759-201ENST00000390224 91 ntBASIC1.9□□□□□ -2.11
ATF4P18848 SNORA26.6-201ENST00000391256 115 ntBASIC1.9□□□□□ -2.11
ATF4P18848 MIR1263-201ENST00000408324 86 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU2-52P-201ENST00000410680 190 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNA5SP144-201ENST00000410846 116 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
ATF4P18848 HMGN1P33-201ENST00000432945 451 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU6-772P-201ENST00000516042 105 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU6-659P-201ENST00000516454 104 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU11-2P-201ENST00000516898 142 ntBASIC1.9□□□□□ -2.11
ATF4P18848 RNU6-165P-201ENST00000517170 99 ntBASIC1.9□□□□□ -2.11
ATF4P18848 AL365222.1-201ENST00000614661 98 ntBASIC1.9□□□□□ -2.11
ATF4P18848 MIR8065-201ENST00000620577 100 ntBASIC1.9□□□□□ -2.11
ATF4P18848 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
ATF4P18848 RNA5SP264-201ENST00000363115 107 ntBASIC1.89□□□□□ -2.11
ATF4P18848 Y_RNA.298-201ENST00000364960 107 ntBASIC1.89□□□□□ -2.11
ATF4P18848 SNORD58C-201ENST00000365223 64 ntBASIC1.89□□□□□ -2.11
ATF4P18848 Y_RNA.346-201ENST00000365385 112 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms