Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 RNY1P2-201ENST00000364820 117 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 RNU6-476P-201ENST00000384726 107 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 TRAJ51-201ENST00000504127 63 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 RNU7-175P-201ENST00000515915 61 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 AC092807.2-201ENST00000609367 243 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 SNORD114-10-201ENST00000363409 72 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 MIR1284-201ENST00000408337 120 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 AL354751.2-201ENST00000415471 210 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 RPS27AP14-201ENST00000422868 454 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.03□□□□□ -2.57
PKHD1P08F94 SNORD63.1-201ENST00000516178 80 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 AC005828.6-201ENST00000606610 232 ntBASIC-1.03□□□□□ -2.57
PKHD1P08F94 RNU6-653P-201ENST00000363074 106 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 RNY1P13-201ENST00000365030 105 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 SNORA18-201ENST00000384416 132 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 SNORA26.4-201ENST00000391188 123 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 MIR190B-201ENST00000401119 79 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 FGF7P6-202ENST00000451282 293 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 RNU2-69P-201ENST00000516061 100 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 MIR548AE1-201ENST00000583292 70 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.04□□□□□ -2.58
PKHD1P08F94 AC008507.2-201ENST00000588402 1176 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 JPX_2.1-201ENST00000614161 69 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 RNU6-481P-201ENST00000384194 107 ntBASIC-1.04□□□□□ -2.58
PKHD1P08F94 RNU6-462P-201ENST00000362659 105 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNY3P11-201ENST00000364153 102 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNY1P12-201ENST00000364251 105 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AL365203.2-201ENST00000423444 196 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.05□□□□□ -2.58
PKHD1P08F94 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 MTCO3P23-201ENST00000561363 289 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 MIR548AG2-201ENST00000581228 64 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AC124303.1-201ENST00000605703 360 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AL607023.1-201ENST00000620045 248 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AC007671.2-201ENST00000637344 619 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU4-10P-201ENST00000364383 140 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 MIR539-201ENST00000365690 78 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AL606845.1-201ENST00000404881 255 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AL359881.1-201ENST00000602916 267 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-266P-201ENST00000364225 107 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
PKHD1P08F94 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
PKHD1P08F94 AC104576.1-201ENST00000524225 88 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AC007494.3-201ENST00000624660 743 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 SNORD115-7-201ENST00000365306 82 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 RNU6-298P-201ENST00000390888 96 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 MTND4LP7-201ENST00000431728 294 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 AC124312.5-201ENST00000604451 268 ntBASIC-1.05□□□□□ -2.58
PKHD1P08F94 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 SNORA26.6-201ENST00000391256 115 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU2-51P-201ENST00000410708 197 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.06□□□□□ -2.58
PKHD1P08F94 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.06□□□□□ -2.58
PKHD1P08F94 MIR4490-201ENST00000582647 84 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 U4.1-201ENST00000620349 87 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 AC073534.2-201ENST00000620377 381 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNY3P9-201ENST00000384727 106 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 MIR519E-201ENST00000385075 84 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-913P-201ENST00000390913 95 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 SNORA36B-201ENST00000410438 131 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 AC018880.2-201ENST00000414265 201 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 AC097635.1-201ENST00000450678 155 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU7-80P-201ENST00000459562 61 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 MIR410-201ENST00000362222 80 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-924P-201ENST00000362926 108 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-767P-201ENST00000384132 107 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNY3P4-201ENST00000384428 101 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 USP9YP23-201ENST00000455085 407 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 MTATP6P15-201ENST00000527233 835 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 MIR4789-201ENST00000577469 82 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 TUSC7.1-201ENST00000610969 165 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 MIR3674-201ENST00000636576 68 ntBASIC-1.06□□□□□ -2.58
PKHD1P08F94 RNY1P11-201ENST00000363759 113 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 AC023449.1-201ENST00000454464 154 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 AC009248.2-201ENST00000619826 254 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 UBL5P4-201ENST00000562584 236 ntBASIC-1.07□□□□□ -2.58
PKHD1P08F94 AC008507.4-201ENST00000585464 127 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms