Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 Y_RNA.346-201ENST00000365385 112 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 SNORA22-201ENST00000383907 134 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 RNU6-42P-201ENST00000384165 107 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 SNORD116-21-201ENST00000384507 92 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 MIR520A-201ENST00000384862 85 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.84□□□□□ -2.11
TOP3BO95985 AC063976.4-201ENST00000421971 163 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.84□□□□□ -2.11
TOP3BO95985 SNORD45.4-201ENST00000516629 73 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 RNU7-28P-201ENST00000516759 62 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 MIR6504-201ENST00000613520 61 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 AC134878.1-201ENST00000619901 243 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TOP3BO95985 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TOP3BO95985 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TOP3BO95985 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.83□□□□□ -2.12
TOP3BO95985 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 SNORD115-28-201ENST00000363931 81 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 SNORA63D-201ENST00000364359 132 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 Y_RNA.336-201ENST00000365307 109 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 Y_RNA.410-201ENST00000383992 113 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 Y_RNA.547-201ENST00000384654 119 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP3BO95985 STAG3L5P-204ENST00000443759 179 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP3BO95985 RNU6-113P-201ENST00000516653 101 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.83□□□□□ -2.12
TOP3BO95985 MIR8054-201ENST00000620877 86 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
TOP3BO95985 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.83□□□□□ -2.12
TOP3BO95985 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TOP3BO95985 MTND5P18-201ENST00000445624 1801 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 Y_RNA.35-201ENST00000362601 101 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 RNU6-440P-201ENST00000390882 105 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 MIR1263-201ENST00000408324 86 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 Y_RNA.649-201ENST00000459077 103 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 RMST_2.1-201ENST00000617263 136 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.82□□□□□ -2.12
TOP3BO95985 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
TOP3BO95985 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TOP3BO95985 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 Y_RNA.366-201ENST00000365540 102 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 MIR548A1-201ENST00000385041 97 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TOP3BO95985 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.81□□□□□ -2.12
TOP3BO95985 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 HMGN2P32-201ENST00000444648 269 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 SNORD36C-201ENST00000516733 66 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 AL773524.1-201ENST00000614065 229 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
TOP3BO95985 MIRLET7C-201ENST00000362160 84 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 SNORA2.2-201ENST00000365473 135 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 RNU6-880P-201ENST00000384526 107 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 CALM2P4-201ENST00000430810 426 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 HSPE1P9-201ENST00000440046 311 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP3BO95985 AC114811.1-201ENST00000507207 168 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 RNA5SP437-201ENST00000517249 129 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 RNU6-1116P-201ENST00000517269 99 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 SNORA28-201ENST00000606769 126 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 MIR6779-201ENST00000617283 64 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
TOP3BO95985 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TOP3BO95985 Y_RNA.528-201ENST00000384575 108 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RNU6-950P-201ENST00000384651 107 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RNA5SP136-201ENST00000410906 107 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RNU6-938P-201ENST00000411285 103 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RPS26P48-201ENST00000491713 339 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RNU6-240P-201ENST00000516098 97 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
TOP3BO95985 MIR6734-201ENST00000621166 68 ntBASIC1.79□□□□□ -2.12
TOP3BO95985 SNORA4.2-201ENST00000365313 147 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 Y_RNA.440-201ENST00000384120 114 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 RNU6-163P-201ENST00000384396 106 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 RN7SKP200-201ENST00000410564 320 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 AP003484.1-201ENST00000530974 250 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms