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Protein–RNA interactions for Protein: O95025
SEMA3D, Semaphorin-3D, human
Predictions only
Length
777 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SEMA3D
O95025
AC013791.1-201
ENST00000616619
62 nt
BASIC
0.14
□□□□□ -2.39
SEMA3D
O95025
G3BP1-214
ENST00000627077
114 nt
TSL 5
BASIC
0.14
□□□□□ -2.39
SEMA3D
O95025
OMD-201
ENST00000375550
2449 nt
APPRIS P1
TSL 1 (best)
BASIC
0.14
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.136-201
ENST00000363444
102 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
SNORA27-201
ENST00000384323
126 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
RNA5SP63-201
ENST00000391225
112 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
RNA5SP496-201
ENST00000391240
109 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MIR1257-201
ENST00000408490
117 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
RNU6-1190P-201
ENST00000410811
104 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MTCO1P5-201
ENST00000433573
344 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
AC087499.4-201
ENST00000448505
178 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
AL844175.1-201
ENST00000455153
323 nt
TSL 5
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
snoU13.2-201
ENST00000459201
104 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
SNORD36C-201
ENST00000516733
66 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MIR3678-201
ENST00000578455
94 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
SNORD92-201
ENST00000585078
85 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
RAC1P9-201
ENST00000604990
392 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MIR376A1-201
ENST00000616574
68 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
NPPA-AS1_2.1-201
ENST00000618496
149 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MIR371B-201
ENST00000638082
66 nt
BASIC
0.13
□□□□□ -2.39
SEMA3D
O95025
MIR367-201
ENST00000362299
68 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
SNORA1.1-201
ENST00000364671
133 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.356-201
ENST00000365475
113 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.424-201
ENST00000384063
103 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.569-201
ENST00000384749
103 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
MIR548A2-201
ENST00000384956
97 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
SNORD12C-201
ENST00000386307
89 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.579-201
ENST00000390939
94 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.587-201
ENST00000391210
103 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
AL138752.1-201
ENST00000452964
351 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
RPS29P24-201
ENST00000486345
171 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
SNORD77.4-201
ENST00000516158
81 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
RNU6-875P-201
ENST00000516488
106 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
RNU7-53P-201
ENST00000516705
60 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
MIR5692C2-201
ENST00000577959
77 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
MIR4431-201
ENST00000579990
94 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
MIR4768-201
ENST00000585270
74 nt
BASIC
0.12
□□□□□ -2.39
SEMA3D
O95025
SNORD118-201
ENST00000363593
134 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.293-201
ENST00000364908
93 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.303-201
ENST00000364998
94 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
RNA5SP117-201
ENST00000365294
118 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
RNU6-815P-201
ENST00000384080
113 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
SNORD61-201
ENST00000384252
73 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
SNORA8.2-201
ENST00000384372
139 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
MIR1302-11-201
ENST00000408051
138 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
MIR1302-9-201
ENST00000408365
138 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
MIR1302-10-201
ENST00000408734
138 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.639-201
ENST00000458981
102 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.715-201
ENST00000517082
110 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
RNU6-1270P-201
ENST00000517128
108 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
MIR4724-201
ENST00000579485
89 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
MIR1302-2-201
ENST00000607096
138 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
AC078938.1-201
ENST00000620993
318 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
AC112487.2-201
ENST00000637950
304 nt
BASIC
0.11
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.197-201
ENST00000364004
102 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
RNU4-10P-201
ENST00000364383
140 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
Y_RNA.567-201
ENST00000384736
106 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
SNORD115-46-201
ENST00000390982
71 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
MTCO2P24-201
ENST00000515611
426 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
RNU6-507P-201
ENST00000516045
100 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
AC133485.4-201
ENST00000561835
220 nt
BASIC
0.1
□□□□□ -2.39
SEMA3D
O95025
MIR30D-201
ENST00000362283
70 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.7-201
ENST00000362352
102 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU4-90P-201
ENST00000362773
141 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU6-1272P-201
ENST00000362776
107 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNA5SP257-201
ENST00000363023
116 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.445-201
ENST00000384168
102 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
MIR563-201
ENST00000385080
79 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
PMCHL1-202
ENST00000423102
261 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
AC073261.1-201
ENST00000429409
121 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU2-11P-201
ENST00000459191
187 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU6-475P-201
ENST00000516073
104 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU2-31P-201
ENST00000516954
155 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RNU6-448P-201
ENST00000517052
107 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
RRM2B-207
ENST00000519962
201 nt
TSL 1 (best)
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
AC100767.1-201
ENST00000528178
123 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
uc_338.16-201
ENST00000621804
95 nt
BASIC
0.09
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.105-201
ENST00000363182
111 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.183-201
ENST00000363882
113 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.251-201
ENST00000364551
99 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
RNU6-662P-201
ENST00000384253
104 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
RNU6-897P-201
ENST00000517135
105 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
AC084365.1-201
ENST00000552470
310 nt
TSL 3
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
AL122017.1-202
ENST00000570612
319 nt
TSL 5
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
MIR4662B-201
ENST00000579498
81 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
AC124312.5-201
ENST00000604451
268 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
MIR6718-201
ENST00000616153
80 nt
BASIC
0.08
□□□□□ -2.4
SEMA3D
O95025
CEP57L1-213
ENST00000520883
2055 nt
TSL 5
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
MIR342-201
ENST00000362212
99 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.30-201
ENST00000362572
97 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
SNORA36.1-201
ENST00000363424
132 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
RNU6-450P-201
ENST00000364654
107 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.263-201
ENST00000364659
114 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
SNORD24-201
ENST00000383884
75 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.394-201
ENST00000383942
103 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
SNORD77.3-201
ENST00000391113
65 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
MIR548I3-201
ENST00000408378
149 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
Y_RNA.617-201
ENST00000410920
90 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
AF228730.3-201
ENST00000436691
102 nt
BASIC
0.07
□□□□□ -2.4
SEMA3D
O95025
RNU6-863P-201
ENST00000515989
104 nt
BASIC
0.07
□□□□□ -2.4
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