Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KLF4O43474 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KLF4O43474 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KLF4O43474 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KLF4O43474 RNU6-690P-201ENST00000365242 106 ntBASIC1.96□□□□□ -2.1
KLF4O43474 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
KLF4O43474 RNU6-406P-201ENST00000516470 107 ntBASIC1.96□□□□□ -2.1
KLF4O43474 MIR3664-201ENST00000579074 99 ntBASIC1.96□□□□□ -2.1
KLF4O43474 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.96□□□□□ -2.1
KLF4O43474 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
KLF4O43474 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KLF4O43474 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
KLF4O43474 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
KLF4O43474 RNU6-902P-201ENST00000517212 91 ntBASIC1.95□□□□□ -2.1
KLF4O43474 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KLF4O43474 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
KLF4O43474 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KLF4O43474 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.95□□□□□ -2.1
KLF4O43474 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KLF4O43474 AC092881.1-201ENST00000638218 2733 ntBASIC1.95□□□□□ -2.1
KLF4O43474 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
KLF4O43474 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KLF4O43474 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
KLF4O43474 AL512310.8-201ENST00000550183 120 ntBASIC1.94□□□□□ -2.1
KLF4O43474 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
KLF4O43474 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
KLF4O43474 Y_RNA.114-201ENST00000363265 113 ntBASIC1.93□□□□□ -2.1
KLF4O43474 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
KLF4O43474 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
KLF4O43474 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
KLF4O43474 AL133373.1-201ENST00000497098 94 ntBASIC1.93□□□□□ -2.1
KLF4O43474 RNU7-41P-201ENST00000515917 61 ntBASIC1.93□□□□□ -2.1
KLF4O43474 RNU6-971P-201ENST00000516920 106 ntBASIC1.93□□□□□ -2.1
KLF4O43474 AC133485.4-201ENST00000561835 220 ntBASIC1.93□□□□□ -2.1
KLF4O43474 AC138907.4-201ENST00000570107 226 ntBASIC1.93□□□□□ -2.1
KLF4O43474 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KLF4O43474 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KLF4O43474 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
KLF4O43474 RNU6-1117P-201ENST00000384525 104 ntBASIC1.92□□□□□ -2.1
KLF4O43474 RNU6-959P-201ENST00000384671 107 ntBASIC1.92□□□□□ -2.1
KLF4O43474 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
KLF4O43474 AL158147.1-201ENST00000443970 75 ntBASIC1.92□□□□□ -2.1
KLF4O43474 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.92□□□□□ -2.1
KLF4O43474 RNU6-62P-201ENST00000516526 102 ntBASIC1.92□□□□□ -2.1
KLF4O43474 RN7SKP88-201ENST00000516847 250 ntBASIC1.92□□□□□ -2.1
KLF4O43474 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
KLF4O43474 7SK.8-201ENST00000612110 250 ntBASIC1.92□□□□□ -2.1
KLF4O43474 7SK.11-201ENST00000615477 250 ntBASIC1.92□□□□□ -2.1
KLF4O43474 7SK.13-201ENST00000622040 250 ntBASIC1.92□□□□□ -2.1
KLF4O43474 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
KLF4O43474 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.92□□□□□ -2.1
KLF4O43474 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KLF4O43474 SNORA1.1-201ENST00000364671 133 ntBASIC1.91□□□□□ -2.1
KLF4O43474 Y_RNA.354-201ENST00000365448 111 ntBASIC1.91□□□□□ -2.1
KLF4O43474 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
KLF4O43474 RN7SKP179-201ENST00000516126 217 ntBASIC1.91□□□□□ -2.1
KLF4O43474 AL096861.1-201ENST00000610899 123 ntBASIC1.91□□□□□ -2.1
KLF4O43474 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
KLF4O43474 AL161722.3-201ENST00000605789 2983 ntBASIC1.91□□□□□ -2.1
KLF4O43474 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
KLF4O43474 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-80P-201ENST00000384195 107 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-1319P-201ENST00000390855 104 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-747P-201ENST00000390928 104 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-241P-201ENST00000391148 104 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-177P-201ENST00000411257 104 ntBASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-237P-201ENST00000515985 71 ntBASIC1.9□□□□□ -2.11
KLF4O43474 CYP3A52P-201ENST00000563326 91 ntBASIC1.9□□□□□ -2.11
KLF4O43474 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.9□□□□□ -2.11
KLF4O43474 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
KLF4O43474 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
KLF4O43474 AC021613.1-201ENST00000623880 111 ntBASIC1.9□□□□□ -2.11
KLF4O43474 U2.22-201ENST00000636441 106 ntBASIC1.9□□□□□ -2.11
KLF4O43474 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KLF4O43474 RNU6-349P-201ENST00000362402 107 ntBASIC1.89□□□□□ -2.11
KLF4O43474 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
KLF4O43474 RPS27P16-201ENST00000425758 201 ntBASIC1.89□□□□□ -2.11
KLF4O43474 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.89□□□□□ -2.11
KLF4O43474 RNU6-240P-201ENST00000516098 97 ntBASIC1.89□□□□□ -2.11
KLF4O43474 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
KLF4O43474 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
KLF4O43474 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.89□□□□□ -2.11
KLF4O43474 AL137067.1-201ENST00000615933 120 ntBASIC1.89□□□□□ -2.11
KLF4O43474 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
KLF4O43474 AL022718.1-201ENST00000412004 84 ntBASIC1.88□□□□□ -2.11
KLF4O43474 RPS3AP1-201ENST00000413190 320 ntBASIC1.88□□□□□ -2.11
KLF4O43474 AL606753.1-201ENST00000427435 87 ntBASIC1.88□□□□□ -2.11
KLF4O43474 AC008267.6-201ENST00000441664 139 ntBASIC1.88□□□□□ -2.11
KLF4O43474 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.88□□□□□ -2.11
KLF4O43474 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
KLF4O43474 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
KLF4O43474 AC021443.1-201ENST00000604478 211 ntBASIC1.88□□□□□ -2.11
KLF4O43474 MIR8065-201ENST00000620577 100 ntBASIC1.88□□□□□ -2.11
KLF4O43474 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KLF4O43474 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KLF4O43474 Y_RNA.294-201ENST00000364916 102 ntBASIC1.87□□□□□ -2.11
KLF4O43474 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KLF4O43474 RNU6-913P-201ENST00000390913 95 ntBASIC1.87□□□□□ -2.11
KLF4O43474 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.87□□□□□ -2.11
KLF4O43474 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms