Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 RN7SKP295-201ENST00000517264 153 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.19□□□□□ -2.6
HMGB3O15347 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 MIR7111-201ENST00000619751 72 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 MIR548A2-201ENST00000384956 97 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 RNU6-332P-201ENST00000391193 108 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 RNU6-908P-201ENST00000410160 94 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 AC023449.1-201ENST00000454464 154 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 RNU7-141P-201ENST00000459304 62 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 RNA5SP169-201ENST00000517268 117 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 MTND3P12-201ENST00000559068 328 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 MIR3662-201ENST00000637030 95 ntBASIC-1.2□□□□□ -2.6
HMGB3O15347 SNORD114-15-201ENST00000364687 72 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
HMGB3O15347 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 AC024067.1-201ENST00000426199 223 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.21□□□□□ -2.6
HMGB3O15347 RNU6-531P-201ENST00000516694 104 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 RNU6-566P-201ENST00000516790 107 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 AC005357.1-201ENST00000588399 301 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 AL162413.1-201ENST00000603198 110 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 AC005014.3-201ENST00000605985 190 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 MIR6863-201ENST00000636112 90 ntBASIC-1.21□□□□□ -2.6
HMGB3O15347 RNU6-490P-201ENST00000362985 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU4-58P-201ENST00000363192 141 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU6-509P-201ENST00000363519 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU6-865P-201ENST00000364772 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU6-47P-201ENST00000383866 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 AC010655.3-201ENST00000478818 450 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 RNU6-693P-201ENST00000516134 107 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 SNORA27.4-201ENST00000516650 95 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 AL512360.1-201ENST00000555346 234 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 NBR2-204ENST00000587322 63 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 AL356055.1-201ENST00000602528 446 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 MIR1244-1-201ENST00000612829 85 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 MIR1244-3-201ENST00000635744 85 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 MIR1244-2-201ENST00000636449 85 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 MIR1244-4-202ENST00000636813 85 ntBASIC-1.22□□□□□ -2.6
HMGB3O15347 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 RNY3P4-201ENST00000384428 101 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 RNA5SP484-201ENST00000458857 111 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 MIR2053-201ENST00000459295 91 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 RNU7-45P-201ENST00000459460 63 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 DEFB117-201ENST00000602356 141 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 AL021707.8-201ENST00000609428 183 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 AC092794.2-201ENST00000620933 563 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 AC093726.3-201ENST00000637588 150 ntBASIC-1.23□□□□□ -2.61
HMGB3O15347 RNY1P13-201ENST00000365030 105 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 SNORD24-201ENST00000383884 75 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 AL160004.2-201ENST00000432935 350 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 RNU6-273P-201ENST00000516937 96 ntBASIC-1.24□□□□□ -2.61
HMGB3O15347 RNU6-451P-201ENST00000362921 107 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 SNORD78.2-201ENST00000391076 69 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 RNU2-14P-201ENST00000411053 191 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.25□□□□□ -2.61
HMGB3O15347 DEFB131E-201ENST00000532329 154 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 AC087588.2-201ENST00000617667 426 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 AL359880.1-201ENST00000621879 266 ntBASIC-1.25□□□□□ -2.61
HMGB3O15347 SNORD81.1-201ENST00000363064 77 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 RNU6-35P-201ENST00000384530 107 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 MIR4662B-201ENST00000579498 81 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 MIR4423-201ENST00000580922 80 ntBASIC-1.26□□□□□ -2.61
HMGB3O15347 MIR302B-201ENST00000362188 73 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 RNY3P3-201ENST00000363816 102 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 SNORA72.4-201ENST00000384174 132 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 SNORD61-201ENST00000384252 73 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 SNORA69.1-201ENST00000390904 137 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 RNU6-956P-201ENST00000458868 103 ntBASIC-1.27□□□□□ -2.61
HMGB3O15347 RNU6-888P-201ENST00000363010 101 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 RNU6-483P-201ENST00000384088 108 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
HMGB3O15347 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 AF228730.3-201ENST00000436691 102 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 AC021146.6-201ENST00000514659 117 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 RNU7-188P-201ENST00000517063 64 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 MIR4659A-201ENST00000580269 81 ntBASIC-1.28□□□□□ -2.61
HMGB3O15347 AC124864.2-201ENST00000624736 186 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 260.6 ms