Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SNORD115-41-201ENST00000363608 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-11-201ENST00000363616 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-5-201ENST00000363633 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-39-201ENST00000363694 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-4-201ENST00000363810 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-16-201ENST00000363887 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-6-201ENST00000363942 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-42-201ENST00000364273 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-15-201ENST00000364809 81 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-1-201ENST00000364961 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-26-201ENST00000365067 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-10-201ENST00000365073 81 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-43-201ENST00000365503 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-36-201ENST00000365629 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 Y_RNA.401-201ENST00000383965 117 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 Y_RNA.618-201ENST00000410949 107 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.08□□□□□ -2.24
SMAD9O15198 RNU7-67P-201ENST00000459003 62 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 RNU7-21P-201ENST00000459430 62 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 Y_RNA.797-201ENST00000515977 94 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 AP003484.1-201ENST00000530974 250 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 SNORD115-40-201ENST00000606510 82 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 MTND1P7-201ENST00000632801 297 ntBASIC1.08□□□□□ -2.24
SMAD9O15198 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMAD9O15198 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 Y_RNA.188-201ENST00000363952 111 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 Y_RNA.494-201ENST00000384432 111 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 RNU7-90P-201ENST00000459216 62 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 RNU2-13P-201ENST00000515909 113 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMAD9O15198 MIR4308-201ENST00000580634 81 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 AC097639.2-201ENST00000603159 172 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 RMST_2.1-201ENST00000617263 136 ntBASIC1.07□□□□□ -2.24
SMAD9O15198 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
SMAD9O15198 Y_RNA.121-201ENST00000363309 113 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 Y_RNA.182-201ENST00000363880 111 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 Y_RNA.200-201ENST00000364018 102 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNY1-201ENST00000364228 113 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNU4-70P-201ENST00000384579 139 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 Y_RNA.571-201ENST00000384753 98 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNU6-578P-201ENST00000390980 103 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 SNORA40.5-201ENST00000391061 128 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNU6-938P-201ENST00000411285 103 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 AF228730.3-201ENST00000436691 102 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.06□□□□□ -2.24
SMAD9O15198 SNORA18.4-201ENST00000516440 124 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 SNORD36C-201ENST00000516733 66 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 RNU6-1271P-201ENST00000517049 105 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.06□□□□□ -2.24
SMAD9O15198 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
SMAD9O15198 SEPT14P17-201ENST00000617978 177 ntBASIC1.06□□□□□ -2.24
SMAD9O15198 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
SMAD9O15198 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.05□□□□□ -2.24
SMAD9O15198 Y_RNA.23-201ENST00000362496 106 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 Y_RNA.83-201ENST00000363005 113 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 SNORA27-201ENST00000384323 126 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 RNU11-2P-201ENST00000516898 142 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 MIR548AO-201ENST00000579992 96 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 AP000942.4-201ENST00000604811 241 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 AC108706.1-201ENST00000611053 297 ntBASIC1.05□□□□□ -2.24
SMAD9O15198 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 RNU6-1189P-201ENST00000383958 107 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SMAD9O15198 RNU4-43P-201ENST00000410628 137 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SMAD9O15198 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
SMAD9O15198 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SMAD9O15198 MIR411-201ENST00000362239 96 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 Y_RNA.410-201ENST00000383992 113 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 SNORA1-201ENST00000384107 130 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 MIR613-201ENST00000385248 95 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 AL392103.1-201ENST00000447000 198 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 snoU13.16-201ENST00000459350 104 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 RPS29P24-201ENST00000486345 171 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 MIR6516-201ENST00000630554 81 ntBASIC1.03□□□□□ -2.24
SMAD9O15198 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.25
SMAD9O15198 RNU6-396P-201ENST00000365369 105 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 SNORA24-201ENST00000384096 131 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
SMAD9O15198 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.02□□□□□ -2.25
SMAD9O15198 MIR2115-201ENST00000516657 100 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 MIR3129-201ENST00000581095 76 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 AC009779.6-201ENST00000603972 165 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 MIR6515-201ENST00000619843 57 ntBASIC1.02□□□□□ -2.25
SMAD9O15198 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMAD9O15198 RNU6-1020P-201ENST00000363684 107 ntBASIC1.01□□□□□ -2.25
SMAD9O15198 Y_RNA.515-201ENST00000384535 112 ntBASIC1.01□□□□□ -2.25
SMAD9O15198 Y_RNA.542-201ENST00000384641 111 ntBASIC1.01□□□□□ -2.25
SMAD9O15198 SNORD77.3-201ENST00000391113 65 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms