Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.370-201ENST00000365589 108 ntBASIC2.66□□□□□ -1.98
SOX1O00570 RNU6-1031P-201ENST00000384773 107 ntBASIC2.66□□□□□ -1.98
SOX1O00570 MIR452-201ENST00000385020 85 ntBASIC2.66□□□□□ -1.98
SOX1O00570 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
SOX1O00570 MIR6873-201ENST00000622788 63 ntBASIC2.66□□□□□ -1.98
SOX1O00570 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SOX1O00570 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SOX1O00570 SNORA70.7-201ENST00000384159 133 ntBASIC2.65□□□□□ -1.99
SOX1O00570 MIR597-201ENST00000384968 97 ntBASIC2.65□□□□□ -1.99
SOX1O00570 MIR136-201ENST00000385207 82 ntBASIC2.65□□□□□ -1.99
SOX1O00570 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.65□□□□□ -1.99
SOX1O00570 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
SOX1O00570 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
SOX1O00570 RNU6-56P-201ENST00000516986 93 ntBASIC2.65□□□□□ -1.99
SOX1O00570 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SOX1O00570 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SOX1O00570 SNORD115-2-201ENST00000362842 82 ntBASIC2.64□□□□□ -1.99
SOX1O00570 Y_RNA.155-201ENST00000363632 101 ntBASIC2.64□□□□□ -1.99
SOX1O00570 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
SOX1O00570 SNORD115-20-201ENST00000365099 82 ntBASIC2.64□□□□□ -1.99
SOX1O00570 RNU6-409P-201ENST00000384114 104 ntBASIC2.64□□□□□ -1.99
SOX1O00570 RNU4-69P-201ENST00000410677 143 ntBASIC2.64□□□□□ -1.99
SOX1O00570 RNU6-733P-201ENST00000410759 104 ntBASIC2.64□□□□□ -1.99
SOX1O00570 RNU7-113P-201ENST00000459273 62 ntBASIC2.64□□□□□ -1.99
SOX1O00570 RNA5SP385-201ENST00000515947 110 ntBASIC2.64□□□□□ -1.99
SOX1O00570 Y_RNA.773-201ENST00000607168 90 ntBASIC2.64□□□□□ -1.99
SOX1O00570 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.64□□□□□ -1.99
SOX1O00570 AC095038.3-201ENST00000634439 195 ntBASIC2.64□□□□□ -1.99
SOX1O00570 MIR203B-201ENST00000636080 86 ntBASIC2.64□□□□□ -1.99
SOX1O00570 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SOX1O00570 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SOX1O00570 Y_RNA.342-201ENST00000365352 113 ntBASIC2.63□□□□□ -1.99
SOX1O00570 SNORA67.3-201ENST00000384366 140 ntBASIC2.63□□□□□ -1.99
SOX1O00570 MIR520A-201ENST00000384862 85 ntBASIC2.63□□□□□ -1.99
SOX1O00570 MIR516B2-201ENST00000385190 85 ntBASIC2.63□□□□□ -1.99
SOX1O00570 RNA5SP465-201ENST00000391195 109 ntBASIC2.63□□□□□ -1.99
SOX1O00570 MIR1283-2-201ENST00000408621 87 ntBASIC2.63□□□□□ -1.99
SOX1O00570 RNA5SP261-201ENST00000410536 106 ntBASIC2.63□□□□□ -1.99
SOX1O00570 RNU7-67P-201ENST00000459003 62 ntBASIC2.63□□□□□ -1.99
SOX1O00570 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
SOX1O00570 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
SOX1O00570 RNU7-53P-201ENST00000516705 60 ntBASIC2.63□□□□□ -1.99
SOX1O00570 RNU6-958P-201ENST00000516995 106 ntBASIC2.63□□□□□ -1.99
SOX1O00570 MIR4694-201ENST00000578534 80 ntBASIC2.63□□□□□ -1.99
SOX1O00570 MIR1255B1-201ENST00000636325 63 ntBASIC2.63□□□□□ -1.99
SOX1O00570 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SOX1O00570 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.62□□□□□ -1.99
SOX1O00570 RNU4-67P-201ENST00000364569 141 ntBASIC2.62□□□□□ -1.99
SOX1O00570 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
SOX1O00570 RNU6-820P-201ENST00000384273 107 ntBASIC2.62□□□□□ -1.99
SOX1O00570 MIR450A2-201ENST00000385022 100 ntBASIC2.62□□□□□ -1.99
SOX1O00570 RNU2-7P-201ENST00000410794 178 ntBASIC2.62□□□□□ -1.99
SOX1O00570 PGBD4P5-201ENST00000445958 426 ntBASIC2.62□□□□□ -1.99
SOX1O00570 RNU7-45P-201ENST00000459460 63 ntBASIC2.62□□□□□ -1.99
SOX1O00570 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.62□□□□□ -1.99
SOX1O00570 AL513534.2-201ENST00000603836 250 ntBASIC2.62□□□□□ -1.99
SOX1O00570 AC062037.1-201ENST00000605302 128 ntBASIC2.62□□□□□ -1.99
SOX1O00570 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.62□□□□□ -1.99
SOX1O00570 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX1O00570 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX1O00570 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX1O00570 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
SOX1O00570 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SOX1O00570 RNU6-832P-201ENST00000363319 107 ntBASIC2.61□□□□□ -1.99
SOX1O00570 Y_RNA.171-201ENST00000363760 102 ntBASIC2.61□□□□□ -1.99
SOX1O00570 Y_RNA.360-201ENST00000365512 102 ntBASIC2.61□□□□□ -1.99
SOX1O00570 RNA5SP492-201ENST00000411330 114 ntBASIC2.61□□□□□ -1.99
SOX1O00570 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
SOX1O00570 RPS29P29-201ENST00000456396 171 ntBASIC2.61□□□□□ -1.99
SOX1O00570 RNU2-13P-201ENST00000515909 113 ntBASIC2.61□□□□□ -1.99
SOX1O00570 RNVU1-2-201ENST00000516326 135 ntBASIC2.61□□□□□ -1.99
SOX1O00570 RNU6-1258P-201ENST00000516911 111 ntBASIC2.61□□□□□ -1.99
SOX1O00570 MIR4506-201ENST00000584693 77 ntBASIC2.61□□□□□ -1.99
SOX1O00570 MIR6845-201ENST00000613182 61 ntBASIC2.61□□□□□ -1.99
SOX1O00570 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.61□□□□□ -1.99
SOX1O00570 RNA5SP325-201ENST00000363756 130 ntBASIC2.6□□□□□ -1.99
SOX1O00570 SNORA24-201ENST00000384096 131 ntBASIC2.6□□□□□ -1.99
SOX1O00570 MIR518A2-201ENST00000384966 87 ntBASIC2.6□□□□□ -1.99
SOX1O00570 MIR577-201ENST00000385196 96 ntBASIC2.6□□□□□ -1.99
SOX1O00570 SNORA48.1-201ENST00000390879 135 ntBASIC2.6□□□□□ -1.99
SOX1O00570 AC026421.1-201ENST00000519101 163 ntBASIC2.6□□□□□ -1.99
SOX1O00570 DNAJC19P9-201ENST00000555084 351 ntBASIC2.6□□□□□ -1.99
SOX1O00570 SUB1P4-201ENST00000566062 339 ntBASIC2.6□□□□□ -1.99
SOX1O00570 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.6□□□□□ -1.99
SOX1O00570 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
SOX1O00570 SNORA22.1-201ENST00000362701 134 ntBASIC2.59□□□□□ -1.99
SOX1O00570 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
SOX1O00570 SNORD77B-201ENST00000391112 67 ntBASIC2.59□□□□□ -1.99
SOX1O00570 AC093850.1-201ENST00000454121 251 ntBASIC2.59□□□□□ -1.99
SOX1O00570 RNA5SP33-201ENST00000516687 98 ntBASIC2.59□□□□□ -1.99
SOX1O00570 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.59□□□□□ -1.99
SOX1O00570 AL513423.1-201ENST00000621695 132 ntBASIC2.59□□□□□ -1.99
SOX1O00570 WWP1P1-201ENST00000466609 2769 ntBASIC2.58□□□□□ -2
SOX1O00570 MIR378A-201ENST00000362177 66 ntBASIC2.58□□□□□ -2
SOX1O00570 Y_RNA.430-201ENST00000384081 110 ntBASIC2.58□□□□□ -2
SOX1O00570 RNU6-1067P-201ENST00000384752 107 ntBASIC2.58□□□□□ -2
SOX1O00570 MIR605-201ENST00000385078 83 ntBASIC2.58□□□□□ -2
SOX1O00570 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
SOX1O00570 RN7SKP123-201ENST00000410732 291 ntBASIC2.58□□□□□ -2
SOX1O00570 AC096949.1-201ENST00000412047 152 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms