Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC243994.1-201ENST00000618627 109 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
PCDHB11Q9Y5F2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
PCDHB11Q9Y5F2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 MIR660-201ENST00000385235 97 ntBASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 SNORD67-201ENST00000390833 111 ntBASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 ELOCP29-201ENST00000588193 334 ntBASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHB11Q9Y5F2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 MIR22-201ENST00000362190 85 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-1313P-201ENST00000362622 102 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 SNORA38-201ENST00000363946 132 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-301P-201ENST00000384277 107 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 MIR526A1-201ENST00000384897 85 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 AC109327.2-201ENST00000448339 378 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 Y_RNA.659-201ENST00000515994 113 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 MIR4709-201ENST00000577272 72 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
PCDHB11Q9Y5F2 RNY1P1-201ENST00000364372 112 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 BTF3P4-201ENST00000418852 495 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 RN7SL429P-201ENST00000479090 223 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 RN7SL489P-201ENST00000486185 223 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 RN7SL327P-201ENST00000488659 223 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 Y_RNA.705-201ENST00000516862 110 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 RN7SL853P-201ENST00000617250 223 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 AP006437.1-201ENST00000641440 3685 ntBASIC2.94□□□□□ -1.94
PCDHB11Q9Y5F2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-112P-201ENST00000363599 104 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 SNORA32-201ENST00000384072 121 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-296P-201ENST00000384608 107 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 Y_RNA.537-201ENST00000384626 109 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 AC022137.1-201ENST00000483735 151 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 RN7SL20P-201ENST00000488827 297 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 AC099513.1-201ENST00000490423 301 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 RNA5SP481-201ENST00000516814 122 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 AC096720.1-201ENST00000604441 183 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 IGLL4P-201ENST00000614590 133 ntBASIC2.93□□□□□ -1.94
PCDHB11Q9Y5F2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 SNORA1.1-201ENST00000364671 133 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 SNORA54-201ENST00000384281 123 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 HMGN2P39-201ENST00000398005 273 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-887P-201ENST00000410660 100 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 snoU13.27-201ENST00000459278 104 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 GTF3AP2-201ENST00000557014 266 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 MIR3124-201ENST00000582636 67 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 AL512310.12-203ENST00000640543 90 ntBASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHB11Q9Y5F2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-675P-201ENST00000384236 104 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 RNU6-972P-201ENST00000391208 107 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 RNA5SP501-201ENST00000410990 112 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 RNA5SP356-201ENST00000515972 94 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 MIR4672-201ENST00000583126 81 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 MIR4439-201ENST00000583746 80 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 AL033523.1-201ENST00000605153 153 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 SNORD3E-202ENST00000627253 216 ntBASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHB11Q9Y5F2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHB11Q9Y5F2 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 Y_RNA.467-201ENST00000384297 102 ntBASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 RNU6-1067P-201ENST00000384752 107 ntBASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 AC108729.3-201ENST00000513484 108 ntBASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 MIR3202-2-201ENST00000635980 79 ntBASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHB11Q9Y5F2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 MIR449A-201ENST00000362113 91 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 MIR424-201ENST00000362227 98 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 SNORD115-35-201ENST00000365122 82 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 RNU2-40P-201ENST00000410833 196 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 snoU13.16-201ENST00000459350 104 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 RN7SL633P-201ENST00000488974 297 ntBASIC2.89□□□□□ -1.95
PCDHB11Q9Y5F2 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms