Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 RNU6-883P-201ENST00000384597 107 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 AC027807.2-201ENST00000616099 408 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 RNU6-792P-201ENST00000363490 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 SNORA62.4-201ENST00000365504 151 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 RNU6-767P-201ENST00000384132 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 RNU6-601P-201ENST00000384540 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 MIR548O-201ENST00000408583 114 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 RNU4-61P-201ENST00000411243 107 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 ELOCP4-201ENST00000420090 333 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 TRAJ51-201ENST00000504127 63 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 MTND4LP18-201ENST00000526864 291 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 MIR4460-201ENST00000577862 86 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 CPDP1-201ENST00000579660 283 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 MIR2681-201ENST00000581814 105 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 MIR6717-201ENST00000622747 73 ntBASIC-1.96□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 MIR599-201ENST00000385069 95 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 MIR124-2-201ENST00000385081 109 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 MIR652-201ENST00000385278 98 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 RPL22P17-201ENST00000438729 315 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 RNU6-759P-201ENST00000516740 103 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 AC092807.2-201ENST00000609367 243 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 AC093783.1-201ENST00000612976 329 ntBASIC-1.97□□□□□ -2.72
SCN11AQ9UI33 SNORD115-28-201ENST00000363931 81 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AL603910.2-201ENST00000407268 136 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 MIR548I3-201ENST00000408378 149 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 MTND3P21-201ENST00000433774 331 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 MTCO2P16-201ENST00000436962 677 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AL121655.1-201ENST00000605811 308 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AL163152.1-201ENST00000642001 374 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 RNY1P12-201ENST00000364251 105 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 RNU6-159P-201ENST00000391080 106 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 MRPL42P2-201ENST00000403169 426 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AL606845.1-201ENST00000404881 255 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 AC022616.6-201ENST00000520479 119 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 MIR8084-201ENST00000614105 89 ntBASIC-1.98□□□□□ -2.73
SCN11AQ9UI33 RNU4-20P-201ENST00000365601 151 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 MTATP6P20-201ENST00000414147 562 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 MTCO1P29-201ENST00000496868 288 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 RNU7-116P-201ENST00000516940 62 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 MIR4308-201ENST00000580634 81 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 AC245884.10-201ENST00000597355 337 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 AL445584.3-201ENST00000617173 78 ntBASIC-1.99□□□□□ -2.73
SCN11AQ9UI33 SNORD115-27-201ENST00000364430 82 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-164P-201ENST00000364604 103 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 Y_RNA.403-201ENST00000383977 101 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 AC097635.1-201ENST00000450678 155 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-998P-201ENST00000515894 101 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 AL158063.1-201ENST00000615349 536 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 AL391262.2-201ENST00000622466 494 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-704P-201ENST00000364162 103 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-1130P-201ENST00000365434 107 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-1310P-201ENST00000384153 107 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-831P-201ENST00000384548 107 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2□□□□□ -2.73
SCN11AQ9UI33 MIR4775-201ENST00000581168 75 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 AC064836.2-201ENST00000609491 462 ntBASIC-2□□□□□ -2.73
SCN11AQ9UI33 RNU6-192P-201ENST00000391253 100 ntBASIC-2.01□□□□□ -2.73
SCN11AQ9UI33 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.01□□□□□ -2.73
SCN11AQ9UI33 CLPTM1LP1-201ENST00000604519 484 ntBASIC-2.01□□□□□ -2.73
SCN11AQ9UI33 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.02□□□□□ -2.73
SCN11AQ9UI33 SNORA72.3-201ENST00000365074 132 ntBASIC-2.02□□□□□ -2.73
SCN11AQ9UI33 RNU6-484P-201ENST00000384016 107 ntBASIC-2.02□□□□□ -2.73
SCN11AQ9UI33 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.02□□□□□ -2.73
SCN11AQ9UI33 MTND2P3-201ENST00000452458 470 ntBASIC-2.02□□□□□ -2.73
SCN11AQ9UI33 MIR335-201ENST00000362173 94 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU6-880P-201ENST00000384526 107 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU4-70P-201ENST00000384579 139 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU7-25P-201ENST00000516544 62 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 AC091912.2-201ENST00000624798 167 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 SNORD115-33-201ENST00000363723 82 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 SNORD18.1-201ENST00000363807 70 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU6-597P-201ENST00000365620 102 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 SNORA40.2-201ENST00000390847 128 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 SNORA26.4-201ENST00000391188 123 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU6-1203P-201ENST00000410703 110 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 AC087683.2-201ENST00000611384 326 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 SEPT14P19-203ENST00000633205 211 ntBASIC-2.03□□□□□ -2.73
SCN11AQ9UI33 RNU6-1209P-201ENST00000363655 107 ntBASIC-2.04□□□□□ -2.74
SCN11AQ9UI33 SNORD114-4-201ENST00000363962 75 ntBASIC-2.04□□□□□ -2.74
SCN11AQ9UI33 RNU6-540P-201ENST00000384622 101 ntBASIC-2.04□□□□□ -2.74
SCN11AQ9UI33 Z82188.1-201ENST00000436709 154 ntBASIC-2.04□□□□□ -2.74
SCN11AQ9UI33 RNU7-79P-201ENST00000516082 62 ntBASIC-2.04□□□□□ -2.74
SCN11AQ9UI33 U2.17-201ENST00000611454 95 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms