Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-588P-201ENST00000410281 105 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU4-57P-201ENST00000515980 135 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 SNORA18.7-201ENST00000516910 131 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1212P-201ENST00000517023 104 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU7-181P-201ENST00000517234 74 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 AC090821.2-201ENST00000523552 176 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD115-28-201ENST00000363931 81 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-449P-201ENST00000383914 107 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 MIR6844-201ENST00000637122 62 ntBASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMARCAL1Q9NZC9 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-774P-201ENST00000363238 107 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNY1P11-201ENST00000363759 113 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU4-11P-201ENST00000365287 132 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA2.2-201ENST00000365473 135 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD37.2-201ENST00000391075 66 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD77.3-201ENST00000391113 65 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 U8.17-201ENST00000391292 132 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-346P-201ENST00000516288 111 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-830P-201ENST00000516353 107 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD36C-201ENST00000516733 66 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-922P-201ENST00000516753 99 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 MIR376A2-201ENST00000636782 80 ntBASIC1.39□□□□□ -2.19
SMARCAL1Q9NZC9 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA25.7-201ENST00000364375 127 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-597P-201ENST00000365620 102 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD28B-201ENST00000390993 75 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 RNA5SP247-201ENST00000411181 105 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-938P-201ENST00000411285 103 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD123-201ENST00000459473 70 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AC004223.1-201ENST00000479840 271 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 RNU7-200P-201ENST00000516105 62 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 MIR548AR-201ENST00000582191 57 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AL365205.2-201ENST00000594586 68 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AC134878.1-201ENST00000619901 243 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SMARCAL1Q9NZC9 AL442644.1-201ENST00000454390 3105 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 AC079140.2-201ENST00000506193 142 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA18.4-201ENST00000516440 124 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 snoU13.31-201ENST00000607291 104 ntBASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SMARCAL1Q9NZC9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 MIR337-201ENST00000362281 93 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.506-201ENST00000384494 102 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 MIR570-201ENST00000384917 97 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 RNU1-78P-201ENST00000391248 165 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 AL451046.2-201ENST00000403074 277 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA74.3-201ENST00000517108 154 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 AP003484.1-201ENST00000530974 250 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 AC112693.2-201ENST00000556538 232 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 MIR3646-201ENST00000578301 84 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-125P-201ENST00000384505 107 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA75.5-201ENST00000391291 81 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 RNA5SP127-201ENST00000411051 133 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 SUMO1P3-201ENST00000439961 304 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-322P-201ENST00000516010 103 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 RNA5SP272-201ENST00000516095 111 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 MIR3133-201ENST00000583157 78 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms