Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 SNORD115-21-201ENST00000362963 81 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-14-201ENST00000363090 81 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-13-201ENST00000363358 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-41-201ENST00000363608 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-11-201ENST00000363616 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-5-201ENST00000363633 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-39-201ENST00000363694 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-4-201ENST00000363810 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-16-201ENST00000363887 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-6-201ENST00000363942 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-42-201ENST00000364273 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-15-201ENST00000364809 81 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-1-201ENST00000364961 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-26-201ENST00000365067 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-10-201ENST00000365073 81 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-43-201ENST00000365503 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-36-201ENST00000365629 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.41□□□□□ -2.18
Q9N2J8 RNU6-768P-201ENST00000384683 107 ntBASIC1.41□□□□□ -2.18
Q9N2J8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
Q9N2J8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Q9N2J8 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
Q9N2J8 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
Q9N2J8 RNU7-121P-201ENST00000516604 62 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD115-40-201ENST00000606510 82 ntBASIC1.41□□□□□ -2.18
Q9N2J8 SNORD28B-201ENST00000390993 75 ntBASIC1.4□□□□□ -2.19
Q9N2J8 SNORA40.5-201ENST00000391061 128 ntBASIC1.4□□□□□ -2.19
Q9N2J8 SNORD77.3-201ENST00000391113 65 ntBASIC1.4□□□□□ -2.19
Q9N2J8 RNA5SP127-201ENST00000411051 133 ntBASIC1.4□□□□□ -2.19
Q9N2J8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
Q9N2J8 RNU6-947P-201ENST00000516264 106 ntBASIC1.4□□□□□ -2.19
Q9N2J8 SNORA18.4-201ENST00000516440 124 ntBASIC1.4□□□□□ -2.19
Q9N2J8 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
Q9N2J8 MIR3646-201ENST00000578301 84 ntBASIC1.4□□□□□ -2.19
Q9N2J8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.4□□□□□ -2.19
Q9N2J8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
Q9N2J8 RNU6-209P-201ENST00000384118 107 ntBASIC1.39□□□□□ -2.19
Q9N2J8 MIR624-201ENST00000385217 97 ntBASIC1.39□□□□□ -2.19
Q9N2J8 SNORA75.5-201ENST00000391291 81 ntBASIC1.39□□□□□ -2.19
Q9N2J8 RNU6-394P-201ENST00000410735 107 ntBASIC1.39□□□□□ -2.19
Q9N2J8 RNU6-938P-201ENST00000411285 103 ntBASIC1.39□□□□□ -2.19
Q9N2J8 snoU13.23-201ENST00000458863 104 ntBASIC1.39□□□□□ -2.19
Q9N2J8 AC108210.2-201ENST00000503681 201 ntBASIC1.39□□□□□ -2.19
Q9N2J8 SNORD36C-201ENST00000516733 66 ntBASIC1.39□□□□□ -2.19
Q9N2J8 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
Q9N2J8 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
Q9N2J8 AC104465.1-201ENST00000611365 139 ntBASIC1.39□□□□□ -2.19
Q9N2J8 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
Q9N2J8 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
Q9N2J8 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
Q9N2J8 MIR7843-201ENST00000622274 79 ntBASIC1.39□□□□□ -2.19
Q9N2J8 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
Q9N2J8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
Q9N2J8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Q9N2J8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
Q9N2J8 RNA5SP48-201ENST00000363969 126 ntBASIC1.38□□□□□ -2.19
Q9N2J8 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
Q9N2J8 Y_RNA.464-201ENST00000384282 110 ntBASIC1.38□□□□□ -2.19
Q9N2J8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.38□□□□□ -2.19
Q9N2J8 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
Q9N2J8 MIR548I3-201ENST00000408378 149 ntBASIC1.38□□□□□ -2.19
Q9N2J8 MIR548I1-201ENST00000408810 149 ntBASIC1.38□□□□□ -2.19
Q9N2J8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
Q9N2J8 MIR5197-201ENST00000583721 112 ntBASIC1.38□□□□□ -2.19
Q9N2J8 AP001485.1-201ENST00000604799 199 ntBASIC1.38□□□□□ -2.19
Q9N2J8 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
Q9N2J8 MIR6844-201ENST00000637122 62 ntBASIC1.38□□□□□ -2.19
Q9N2J8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Q9N2J8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Q9N2J8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.37□□□□□ -2.19
Q9N2J8 RNU6-60P-201ENST00000364792 103 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RNU6-449P-201ENST00000383914 107 ntBASIC1.37□□□□□ -2.19
Q9N2J8 SNORA27-201ENST00000384323 126 ntBASIC1.37□□□□□ -2.19
Q9N2J8 SNORA51.10-201ENST00000384418 136 ntBASIC1.37□□□□□ -2.19
Q9N2J8 MT-TR-201ENST00000387439 65 ntBASIC1.37□□□□□ -2.19
Q9N2J8 MIR764-201ENST00000390811 85 ntBASIC1.37□□□□□ -2.19
Q9N2J8 Y_RNA.580-201ENST00000391004 95 ntBASIC1.37□□□□□ -2.19
Q9N2J8 SNORD37.2-201ENST00000391075 66 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RPS26P48-201ENST00000491713 339 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RNU2-13P-201ENST00000515909 113 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
Q9N2J8 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
Q9N2J8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.36□□□□□ -2.19
Q9N2J8 RNU6-804P-201ENST00000384286 107 ntBASIC1.36□□□□□ -2.19
Q9N2J8 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
Q9N2J8 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
Q9N2J8 RNU7-41P-201ENST00000515917 61 ntBASIC1.36□□□□□ -2.19
Q9N2J8 CYP3A52P-201ENST00000563326 91 ntBASIC1.36□□□□□ -2.19
Q9N2J8 MIR3144-201ENST00000579460 79 ntBASIC1.36□□□□□ -2.19
Q9N2J8 MIR4791-201ENST00000607666 84 ntBASIC1.36□□□□□ -2.19
Q9N2J8 AC243994.1-201ENST00000618627 109 ntBASIC1.36□□□□□ -2.19
Q9N2J8 MTND1P7-201ENST00000632801 297 ntBASIC1.36□□□□□ -2.19
Q9N2J8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
Q9N2J8 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
Q9N2J8 SNORD116-18-201ENST00000383961 92 ntBASIC1.35□□□□□ -2.19
Q9N2J8 MIR570-201ENST00000384917 97 ntBASIC1.35□□□□□ -2.19
Q9N2J8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms