Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RN7SKP19-201ENST00000516016 252 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 RNU6-759P-201ENST00000516740 103 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 RNU6-256P-201ENST00000516747 97 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 RNA5SP66-201ENST00000517178 101 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 MIR2355-201ENST00000517199 87 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 AC040926.1-201ENST00000530195 238 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 AC024405.2-202ENST00000532731 184 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 ZNF519P2-201ENST00000557032 169 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 AC127455.1-201ENST00000565496 145 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 MIR4528-201ENST00000577763 90 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 RNU6-86P-201ENST00000606534 107 ntBASIC-0.78□□□□□ -2.53
LIMD2Q9BT23 RNU6-874P-201ENST00000362390 105 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 RNU6-961P-201ENST00000363893 105 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 SNORD116-11-201ENST00000383882 92 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 RNU6-584P-201ENST00000410350 95 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 SNORD11-201ENST00000459124 84 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 RNU6-881P-201ENST00000516813 102 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC009094.1-201ENST00000564443 426 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AP001282.2-201ENST00000616149 309 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AL662814.1-201ENST00000617364 121 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC105081.1-201ENST00000617727 106 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC084368.1-201ENST00000620935 65 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 AC007494.3-201ENST00000624660 743 ntBASIC-0.79□□□□□ -2.54
LIMD2Q9BT23 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNA5SP192-201ENST00000364404 120 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU6-926P-201ENST00000384075 107 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 SNORA26.8-201ENST00000391306 124 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU6-938P-201ENST00000411285 103 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 AL365203.2-201ENST00000423444 196 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU7-66P-201ENST00000459469 62 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RPS29P24-201ENST00000486345 171 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU7-115P-201ENST00000516433 55 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNA5SP476-201ENST00000516613 103 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 MTND5P34-201ENST00000568888 325 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 MTATP6P24-201ENST00000576835 677 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 AC040904.1-201ENST00000590850 223 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 uc_338.19-201ENST00000616808 99 ntBASIC-0.8□□□□□ -2.54
LIMD2Q9BT23 RNU6-490P-201ENST00000362985 107 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 RNU4-16P-201ENST00000364737 141 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 RNU6-842P-201ENST00000384269 107 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 SNORA27-201ENST00000384323 126 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 RNU6-24P-201ENST00000384440 107 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 SNORD41.1-201ENST00000391000 69 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 MIR548O-201ENST00000408583 114 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 MIR4280-201ENST00000582178 76 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 AC073648.5-201ENST00000603502 305 ntBASIC-0.81□□□□□ -2.54
LIMD2Q9BT23 MIR409-201ENST00000362237 79 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 RNA5SP245-201ENST00000364239 121 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 SNORD77.3-201ENST00000391113 65 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 AL445193.1-201ENST00000441183 141 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 RPL39P25-201ENST00000449384 154 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 AC244505.6-201ENST00000452829 130 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 SNORD5.1-201ENST00000458800 75 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 RNU7-87P-201ENST00000459343 62 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 SNORD38.3-201ENST00000516599 73 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 AC005014.2-201ENST00000607795 599 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 AC027449.1-201ENST00000608890 407 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 AC068137.3-201ENST00000639191 341 ntBASIC-0.82□□□□□ -2.54
LIMD2Q9BT23 SNORD115-28-201ENST00000363931 81 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 RNU6-306P-201ENST00000384617 107 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 SNORD56B-201ENST00000384713 71 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 MTND2P22-201ENST00000444325 1033 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 SNORA25.13-201ENST00000516395 103 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 AL133255.1-201ENST00000606374 441 ntBASIC-0.83□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 MTND3P7-201ENST00000474435 343 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AC087752.4-201ENST00000605911 462 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AC022140.2-201ENST00000623500 188 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 AC093726.3-201ENST00000637588 150 ntBASIC-0.84□□□□□ -2.54
LIMD2Q9BT23 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 RNU4-36P-201ENST00000364294 144 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 MIR9-2-201ENST00000384838 87 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 SNORA26.6-201ENST00000391256 115 ntBASIC-0.85□□□□□ -2.55
LIMD2Q9BT23 MIR548I3-201ENST00000408378 149 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 227.3 ms