Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-424P-201ENST00000384367 105 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 RNU6-950P-201ENST00000384651 107 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 RNU6-1031P-201ENST00000384773 107 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 MIR516B2-201ENST00000385190 85 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 MIRLET7F2-201ENST00000385277 83 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 RNU6-113P-201ENST00000516653 101 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 AC027279.3-201ENST00000625055 122 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.86□□□□□ -2.11
TIMP4Q99727 AP000648.3-201ENST00000623539 4507 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 AL596211.1-201ENST00000569873 2277 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TIMP4Q99727 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TIMP4Q99727 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TIMP4Q99727 Y_RNA.241-201ENST00000364470 117 ntBASIC1.85□□□□□ -2.11
TIMP4Q99727 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TIMP4Q99727 RNU7-181P-201ENST00000517234 74 ntBASIC1.85□□□□□ -2.11
TIMP4Q99727 SUB1P4-201ENST00000566062 339 ntBASIC1.85□□□□□ -2.11
TIMP4Q99727 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.85□□□□□ -2.11
TIMP4Q99727 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
TIMP4Q99727 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TIMP4Q99727 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TIMP4Q99727 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.11
TIMP4Q99727 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
TIMP4Q99727 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 RNU4-52P-201ENST00000384209 138 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 HMGN2P38-201ENST00000423806 265 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.84□□□□□ -2.11
TIMP4Q99727 AC087499.4-201ENST00000448505 178 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 HSPE1P19-201ENST00000603327 295 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
TIMP4Q99727 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.84□□□□□ -2.11
TIMP4Q99727 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
TIMP4Q99727 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 U8.17-201ENST00000391292 132 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 RNA5SP136-201ENST00000410906 107 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 AC063976.4-201ENST00000421971 163 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 RPS26P48-201ENST00000491713 339 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 MIR4778-201ENST00000577635 80 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
TIMP4Q99727 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TIMP4Q99727 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
TIMP4Q99727 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
TIMP4Q99727 RNU6-349P-201ENST00000362402 107 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 RNU4-16P-201ENST00000364737 141 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 RNY1P6-201ENST00000384193 109 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 SNORA27-201ENST00000384323 126 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 MIR1267-201ENST00000408723 78 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 RNU7-80P-201ENST00000459562 61 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 AC021443.1-201ENST00000604478 211 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 AC021506.2-201ENST00000612354 169 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 AC091932.4-201ENST00000623386 200 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.82□□□□□ -2.12
TIMP4Q99727 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
TIMP4Q99727 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 RNU6-880P-201ENST00000384526 107 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 snoU13.27-201ENST00000459278 104 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 RNY4P20-201ENST00000516678 93 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 SUMO2P16-201ENST00000519475 264 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 U1.36-201ENST00000620684 176 ntBASIC1.81□□□□□ -2.12
TIMP4Q99727 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
TIMP4Q99727 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TIMP4Q99727 Y_RNA.454-201ENST00000384224 113 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TIMP4Q99727 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 RNA5SP450-201ENST00000411206 102 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 AL591806.2-201ENST00000433122 173 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 snoU13.23-201ENST00000458863 104 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 RNU7-164P-201ENST00000459221 62 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.8□□□□□ -2.12
TIMP4Q99727 RNU6-830P-201ENST00000516353 107 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 AC007012.1-201ENST00000567192 175 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 MIR5089-201ENST00000580047 84 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 MIR4524B-201ENST00000581569 115 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 SNORD3E-202ENST00000627253 216 ntBASIC1.8□□□□□ -2.12
TIMP4Q99727 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TIMP4Q99727 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.79□□□□□ -2.12
TIMP4Q99727 MIR302B-201ENST00000362188 73 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 Y_RNA.549-201ENST00000384657 102 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 MIR570-201ENST00000384917 97 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 MIR136-201ENST00000385207 82 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms