Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC022523.2-201ENST00000561045 150 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 MIR3944-201ENST00000581277 108 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 MIR3163-201ENST00000581592 73 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 AL020996.3-201ENST00000606617 222 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 MIR8074-201ENST00000615081 81 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CALR3Q96L12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CALR3Q96L12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CALR3Q96L12 SNORD12C-201ENST00000386307 89 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 MT-TI-201ENST00000387365 69 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 RNU6-913P-201ENST00000390913 95 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 AC004812.1-201ENST00000540773 146 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 AC103810.6-201ENST00000606708 136 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 AC008133.2-201ENST00000624540 351 ntBASIC2.71□□□□□ -1.98
CALR3Q96L12 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CALR3Q96L12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CALR3Q96L12 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CALR3Q96L12 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 MIR17-201ENST00000385012 84 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 SNORA26.6-201ENST00000391256 115 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 SNORA77B-201ENST00000578179 125 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 MIR5694-201ENST00000581190 76 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 MIR5195-201ENST00000583555 115 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 MIR6717-201ENST00000622747 73 ntBASIC2.7□□□□□ -1.98
CALR3Q96L12 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CALR3Q96L12 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CALR3Q96L12 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CALR3Q96L12 Y_RNA.85-201ENST00000363014 111 ntBASIC2.69□□□□□ -1.98
CALR3Q96L12 Y_RNA.531-201ENST00000384589 121 ntBASIC2.69□□□□□ -1.98
CALR3Q96L12 Y_RNA.549-201ENST00000384657 102 ntBASIC2.69□□□□□ -1.98
CALR3Q96L12 AL512326.2-201ENST00000426359 151 ntBASIC2.69□□□□□ -1.98
CALR3Q96L12 AL589743.1-201ENST00000551932 2712 ntBASIC2.69□□□□□ -1.98
CALR3Q96L12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CALR3Q96L12 SNORA22.1-201ENST00000362701 134 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 RNU6-1107P-201ENST00000364817 104 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 Y_RNA.430-201ENST00000384081 110 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 AC015688.6-201ENST00000577737 104 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 ELOCP29-201ENST00000588193 334 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 MIR6841-201ENST00000637129 72 ntBASIC2.68□□□□□ -1.98
CALR3Q96L12 Y_RNA.362-201ENST00000365518 110 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 MIR548D2-201ENST00000384955 97 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 RNU6-1190P-201ENST00000410811 104 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 RNU7-113P-201ENST00000459273 62 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 AL513534.2-201ENST00000603836 250 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 AL035470.1-201ENST00000622571 220 ntBASIC2.67□□□□□ -1.98
CALR3Q96L12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CALR3Q96L12 Y_RNA.49-201ENST00000362714 112 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 SNORA63.5-201ENST00000363548 123 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 Y_RNA.299-201ENST00000364973 94 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 SNORA9-201ENST00000384215 133 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 SNORA48.7-201ENST00000391302 135 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 RPS23P4-201ENST00000487908 423 ntBASIC2.66□□□□□ -1.98
CALR3Q96L12 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CALR3Q96L12 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 Y_RNA.116-201ENST00000363292 103 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 RNU7-6P-201ENST00000516845 62 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 IGKV3-31-201ENST00000523109 329 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 AC079600.2-201ENST00000550076 130 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.65□□□□□ -1.99
CALR3Q96L12 AC007179.3-201ENST00000604976 235 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 MIR8055-201ENST00000610739 97 ntBASIC2.65□□□□□ -1.99
CALR3Q96L12 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.65□□□□□ -1.99
CALR3Q96L12 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CALR3Q96L12 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CALR3Q96L12 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CALR3Q96L12 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CALR3Q96L12 Y_RNA.171-201ENST00000363760 102 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 RPS3AP1-201ENST00000413190 320 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 AC079804.2-201ENST00000490376 200 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 AC113410.1-201ENST00000505029 247 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 AC103810.8-201ENST00000607347 118 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CALR3Q96L12 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 MIR4251-201ENST00000635819 61 ntBASIC2.64□□□□□ -1.99
CALR3Q96L12 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.64□□□□□ -1.99
CALR3Q96L12 SNORD115-2-201ENST00000362842 82 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 SNORA1.1-201ENST00000364671 133 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 SNORD115-20-201ENST00000365099 82 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 SNORD41-201ENST00000386967 70 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 RNU6-922P-201ENST00000516753 99 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 RNU6-1258P-201ENST00000516911 111 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 AL357312.1-201ENST00000603879 298 ntBASIC2.63□□□□□ -1.99
CALR3Q96L12 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 RNU6-147P-201ENST00000383983 107 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 RNA5SP171-201ENST00000391071 115 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 HMGN1P33-201ENST00000432945 451 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 RPL39P34-201ENST00000477141 156 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 SNORD111.1-201ENST00000516421 86 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 uc_338.28-201ENST00000612082 187 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
CALR3Q96L12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CALR3Q96L12 Y_RNA.344-201ENST00000365381 112 ntBASIC2.61□□□□□ -1.99
CALR3Q96L12 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.61□□□□□ -1.99
CALR3Q96L12 AL031737.1-201ENST00000450125 223 ntBASIC2.61□□□□□ -1.99
CALR3Q96L12 RNU7-41P-201ENST00000515917 61 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms