Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU6-998P-201ENST00000515894 101 ntBASIC1.98□□□□□ -2.09
FOXRED1Q96CU9 AC022254.1-201ENST00000567857 235 ntBASIC1.98□□□□□ -2.09
FOXRED1Q96CU9 AC103810.6-201ENST00000606708 136 ntBASIC1.98□□□□□ -2.09
FOXRED1Q96CU9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
FOXRED1Q96CU9 AP000648.3-201ENST00000623539 4507 ntBASIC1.98□□□□□ -2.09
FOXRED1Q96CU9 Y_RNA.353-201ENST00000365440 108 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 RNU7-67P-201ENST00000459003 62 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 RNU6-240P-201ENST00000516098 97 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 RNU7-53P-201ENST00000516705 60 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 AC108081.1-201ENST00000604358 221 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 AC106754.2-201ENST00000623006 233 ntBASIC1.97□□□□□ -2.09
FOXRED1Q96CU9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
FOXRED1Q96CU9 RNU4-82P-201ENST00000362443 140 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP259-201ENST00000365541 109 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR513A1-201ENST00000385138 129 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP136-201ENST00000410906 107 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 SNORA74.3-201ENST00000517108 154 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR548AR-201ENST00000582191 57 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 AC025166.1-201ENST00000612411 163 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
FOXRED1Q96CU9 MIR449A-201ENST00000362113 91 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNU6-349P-201ENST00000362402 107 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNU6-439P-201ENST00000384188 106 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 MIR1263-201ENST00000408324 86 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNU6-1064P-201ENST00000410626 104 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 AL161935.2-201ENST00000414627 60 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RPS29P29-201ENST00000456396 171 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNU6-781P-201ENST00000516377 101 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 RNU7-43P-201ENST00000516554 64 ntBASIC1.95□□□□□ -2.1
FOXRED1Q96CU9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AL451046.2-201ENST00000403074 277 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP508-201ENST00000411327 119 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 RNU2-11P-201ENST00000459191 187 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AC046143.2-201ENST00000609789 160 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AC243994.1-201ENST00000618627 109 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AC009831.4-201ENST00000620744 325 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AL121890.5-201ENST00000620848 304 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 AC095038.3-201ENST00000634439 195 ntBASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXRED1Q96CU9 SNORA67.4-201ENST00000384688 142 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 RNU6-476P-201ENST00000384726 107 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 MIRLET7F2-201ENST00000385277 83 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP261-201ENST00000410536 106 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 RNU6-917P-201ENST00000516294 104 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 RNU6-958P-201ENST00000516995 106 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 AC021443.1-201ENST00000604478 211 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MIR653-201ENST00000385279 96 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MIR548A3-201ENST00000385297 97 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 AL023284.1-201ENST00000403956 276 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 Y_RNA.630-201ENST00000411370 108 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 RNU2-13P-201ENST00000515909 113 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MTND5P34-201ENST00000568888 325 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MIR3152-201ENST00000579801 74 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MIR3683-201ENST00000580847 82 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 AL670379.3-201ENST00000605040 251 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MIR4791-201ENST00000607666 84 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
FOXRED1Q96CU9 MTND5P18-201ENST00000445624 1801 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 SNORA24-201ENST00000384096 131 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 RNU6-1144P-201ENST00000384247 104 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 SNORA51.10-201ENST00000384418 136 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 MIR520C-201ENST00000385005 87 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 MIR759-201ENST00000390224 91 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 SNORD28B-201ENST00000390993 75 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 RNU6-893P-201ENST00000458841 100 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 COX6CP6-201ENST00000490840 228 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 AC008413.1-201ENST00000511864 177 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 IGKV1-22-201ENST00000524313 326 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
FOXRED1Q96CU9 RNU4-53P-201ENST00000410828 140 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 289.5 ms