Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
NPIPB3Q92617 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
NPIPB3Q92617 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.43□□□□□ -2.18
NPIPB3Q92617 AC064859.1-201ENST00000624741 174 ntBASIC1.43□□□□□ -2.18
NPIPB3Q92617 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NPIPB3Q92617 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPIPB3Q92617 MIR449A-201ENST00000362113 91 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 RNU7-96P-201ENST00000459535 64 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 RPS29P24-201ENST00000486345 171 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 RNU7-41P-201ENST00000515917 61 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 MTND5P41-201ENST00000517498 206 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 MIR4435-1-201ENST00000582552 80 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 MIR4791-201ENST00000607666 84 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 AC243994.1-201ENST00000618627 109 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 Y_RNA.778-201ENST00000620203 90 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 MIR6852-201ENST00000621699 66 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.42□□□□□ -2.18
NPIPB3Q92617 MIR3658-201ENST00000636291 56 ntBASIC1.42□□□□□ -2.18
NPIPB3Q92617 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPIPB3Q92617 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NPIPB3Q92617 RNU6-1082P-201ENST00000364574 107 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 SNORA24-201ENST00000384096 131 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 MIR570-201ENST00000384917 97 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 MIR23A-201ENST00000385245 73 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 AL603908.1-201ENST00000406098 201 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.41□□□□□ -2.18
NPIPB3Q92617 SUMO1P3-201ENST00000439961 304 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 MIR3618-201ENST00000580330 88 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 MIR4251-201ENST00000635819 61 ntBASIC1.41□□□□□ -2.18
NPIPB3Q92617 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NPIPB3Q92617 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.18
NPIPB3Q92617 RNU6-151P-201ENST00000364158 107 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU4-11P-201ENST00000365287 132 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU6-1336P-201ENST00000383886 109 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNY1P5-201ENST00000383890 115 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 Y_RNA.494-201ENST00000384432 111 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU6-588P-201ENST00000410281 105 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU7-67P-201ENST00000459003 62 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU7-80P-201ENST00000459562 61 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 UBE2DNL-203ENST00000474922 222 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 UBL5P3-201ENST00000475112 231 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU7-200P-201ENST00000516105 62 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 RNU7-53P-201ENST00000516705 60 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.4□□□□□ -2.19
NPIPB3Q92617 AC131055.1-201ENST00000584626 316 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 MIR376A2-201ENST00000636782 80 ntBASIC1.4□□□□□ -2.19
NPIPB3Q92617 ZNF355P-201ENST00000427301 3216 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 Y_RNA.454-201ENST00000384224 113 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 MIR548M-201ENST00000408260 86 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 AL035398.1-201ENST00000430869 322 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 AC003989.2-201ENST00000440224 169 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 AL133373.1-201ENST00000497098 94 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 RNU6-998P-201ENST00000515894 101 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 Y_RNA.703-201ENST00000516846 111 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 RNU7-70P-201ENST00000516941 66 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 AC112693.2-201ENST00000556538 232 ntBASIC1.39□□□□□ -2.19
NPIPB3Q92617 SNORD48-201ENST00000364953 64 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 Y_RNA.351-201ENST00000365436 96 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 RNU6-746P-201ENST00000384112 109 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 Y_RNA.500-201ENST00000384466 111 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 Y_RNA.506-201ENST00000384494 102 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 RNU6-1054P-201ENST00000411293 104 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 RNU6-958P-201ENST00000516995 106 ntBASIC1.38□□□□□ -2.19
NPIPB3Q92617 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
NPIPB3Q92617 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NPIPB3Q92617 AC092881.1-201ENST00000638218 2733 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 Y_RNA.52-201ENST00000362760 96 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 RNU6-774P-201ENST00000363238 107 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 Y_RNA.400-201ENST00000383963 111 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 RNU6-125P-201ENST00000384505 107 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 MIR513C-201ENST00000401352 84 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 CYCSP49-201ENST00000420810 319 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 AC245047.7-201ENST00000440265 293 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 RNU7-73P-201ENST00000458743 63 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 snoU13.16-201ENST00000459350 104 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 SNORA31.4-201ENST00000516049 129 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 RNU6-1149P-201ENST00000516810 97 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 MIR3133-201ENST00000583157 78 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.37□□□□□ -2.19
NPIPB3Q92617 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.37□□□□□ -2.19
NPIPB3Q92617 MIR302B-201ENST00000362188 73 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 Y_RNA.497-201ENST00000384447 98 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 Y_RNA.584-201ENST00000391090 114 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 SCARNA15-202ENST00000516881 127 ntBASIC1.36□□□□□ -2.19
NPIPB3Q92617 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.36□□□□□ -2.19
NPIPB3Q92617 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NPIPB3Q92617 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
NPIPB3Q92617 MIR342-201ENST00000362212 99 ntBASIC1.35□□□□□ -2.19
NPIPB3Q92617 Y_RNA.215-201ENST00000364204 112 ntBASIC1.35□□□□□ -2.19
NPIPB3Q92617 RNU1-133P-201ENST00000364867 167 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms