Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNORD36C-201ENST00000516733 66 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR1302-2-201ENST00000607096 138 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 SNORD38B-202ENST00000625943 69 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 Z97988.1-201ENST00000637697 135 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.37-201ENST00000362606 108 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.105-201ENST00000363182 111 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RNU4-10P-201ENST00000364383 140 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.263-201ENST00000364659 114 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RNU6-1138P-201ENST00000365359 106 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.424-201ENST00000384063 103 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 MIR548A2-201ENST00000384956 97 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 AL138752.1-201ENST00000452964 351 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RNU7-73P-201ENST00000458743 63 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 RAC1P9-201ENST00000604990 392 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 uc_338.22-201ENST00000622722 187 ntBASIC0.23□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.14-201ENST00000362415 103 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU6-450P-201ENST00000364654 107 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU4-45P-201ENST00000365469 141 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORA27-201ENST00000384323 126 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 MIR125B2-201ENST00000385128 89 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORD12C-201ENST00000386307 89 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-46-201ENST00000390982 71 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORA40.5-201ENST00000391061 128 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.587-201ENST00000391210 103 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.645-201ENST00000391229 102 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORD100-201ENST00000408573 76 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU6-602P-201ENST00000411155 105 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU7-185P-201ENST00000459215 60 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU6-693P-201ENST00000516134 107 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORD77.4-201ENST00000516158 81 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 RNU6-897P-201ENST00000517135 105 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 MIR5692C2-201ENST00000577959 77 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 AC090897.1-201ENST00000580909 226 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 MIR4795-201ENST00000584182 89 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 AC124312.5-201ENST00000604451 268 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.22□□□□□ -2.37
CCDC50Q8IVM0 MIR367-201ENST00000362299 68 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.293-201ENST00000364908 93 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.445-201ENST00000384168 102 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 SNORD61-201ENST00000384252 73 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1009P-201ENST00000390996 107 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 RNA5SP496-201ENST00000391240 109 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 RNU6-121P-201ENST00000410525 99 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 AC087499.4-201ENST00000448505 178 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 MIR18B-201ENST00000454574 71 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 RNU7-156P-201ENST00000517214 74 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 SNORA4-201ENST00000584302 138 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 AC022709.1-201ENST00000615967 87 ntBASIC0.21□□□□□ -2.38
CCDC50Q8IVM0 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.31-201ENST00000362574 102 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU4-90P-201ENST00000362773 141 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1272P-201ENST00000362776 107 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.112-201ENST00000363250 102 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 SNORA63C-201ENST00000364578 129 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-662P-201ENST00000384253 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 PMCHL1-202ENST00000423102 261 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 MTND4P19-201ENST00000446659 478 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 snoU13.2-201ENST00000459201 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RPS29P24-201ENST00000486345 171 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 MTCO2P24-201ENST00000515611 426 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-475P-201ENST00000516073 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 MIR4724-201ENST00000579485 89 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
CCDC50Q8IVM0 MIR369-201ENST00000362155 70 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.183-201ENST00000363882 113 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 MIR1257-201ENST00000408490 117 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 RNU2-70P-201ENST00000410718 179 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms