Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.37-201ENST00000362606 108 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 SNORA38-201ENST00000363946 132 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 RNU6-755P-201ENST00000364400 103 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.410-201ENST00000383992 113 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 AC114811.1-201ENST00000507207 168 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 AL670379.3-201ENST00000605040 251 ntBASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.4-201ENST00000362333 112 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 SNORD115-28-201ENST00000363931 81 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 MIR802-201ENST00000390235 94 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 SNORA26.9-201ENST00000391322 122 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 AC063976.4-201ENST00000421971 163 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 CALM2P4-201ENST00000430810 426 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 RNU6-113P-201ENST00000516653 101 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 SUB1P4-201ENST00000566062 339 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 AC025166.1-201ENST00000612411 163 ntBASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
YTHDF3Q7Z739 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 MTND5P18-201ENST00000445624 1801 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 Y_RNA.35-201ENST00000362601 101 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 Y_RNA.366-201ENST00000365540 102 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 RNU6-1189P-201ENST00000383958 107 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 U8.13-201ENST00000390842 128 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 SNORA48.1-201ENST00000390879 135 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 RNA5SP465-201ENST00000391195 109 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 HMGN2P32-201ENST00000444648 269 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 RPS26P48-201ENST00000491713 339 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 AC108729.3-201ENST00000513484 108 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
YTHDF3Q7Z739 Y_RNA.346-201ENST00000365385 112 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 Y_RNA.440-201ENST00000384120 114 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 RNU6-424P-201ENST00000384367 105 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 MIR548A3-201ENST00000385297 97 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 U8.16-201ENST00000391279 133 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 SNORD23.1-201ENST00000408212 104 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 CYCTP-201ENST00000504253 315 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 RNA5SP437-201ENST00000517249 129 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 SNORA28-201ENST00000606769 126 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 AC027279.3-201ENST00000625055 122 ntBASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
YTHDF3Q7Z739 RNU6-349P-201ENST00000362402 107 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 SNORA2.2-201ENST00000365473 135 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 SNORD116-21-201ENST00000384507 92 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 SNORD14A-201ENST00000606526 91 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
YTHDF3Q7Z739 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-112P-201ENST00000363599 104 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-163P-201ENST00000384396 106 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-1031P-201ENST00000384773 107 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 MIR1263-201ENST00000408324 86 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 Y_RNA.649-201ENST00000459077 103 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-240P-201ENST00000516098 97 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-830P-201ENST00000516353 107 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNA5SP168-201ENST00000516642 112 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 AP003484.1-201ENST00000530974 250 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 MIR6845-201ENST00000613182 61 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 AL137067.1-201ENST00000615933 120 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 AL121890.5-201ENST00000620848 304 ntBASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
YTHDF3Q7Z739 RNU6-833P-201ENST00000363486 107 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 SNORA22-201ENST00000383907 134 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 MIR548A1-201ENST00000385041 97 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 RN7SKP200-201ENST00000410564 320 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 AC087499.4-201ENST00000448505 178 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 RNU6-1053P-201ENST00000515930 101 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 SNORA31.4-201ENST00000516049 129 ntBASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
YTHDF3Q7Z739 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
YTHDF3Q7Z739 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
YTHDF3Q7Z739 Y_RNA.494-201ENST00000384432 111 ntBASIC1.77□□□□□ -2.13
YTHDF3Q7Z739 Y_RNA.528-201ENST00000384575 108 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 265.1 ms