Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 MIR513A2-201ENST00000385249 127 ntBASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 AC083863.1-201ENST00000438811 231 ntBASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 SUB1P4-201ENST00000566062 339 ntBASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 MIR3935-201ENST00000583472 104 ntBASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SAMD1Q6SPF0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SAMD1Q6SPF0 SNORD45.1-201ENST00000363181 77 ntBASIC4.56□□□□□ -1.68
SAMD1Q6SPF0 CYCSP30-201ENST00000546447 172 ntBASIC4.56□□□□□ -1.68
SAMD1Q6SPF0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.56□□□□□ -1.68
SAMD1Q6SPF0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 RN7SL601P-201ENST00000471221 293 ntBASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 AC087499.8-201ENST00000578406 226 ntBASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 MIR8053-201ENST00000613344 75 ntBASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SAMD1Q6SPF0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 MIR597-201ENST00000384968 97 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 MIR1251-201ENST00000408552 70 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 AC011753.1-201ENST00000451001 220 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 RN7SL594P-201ENST00000470590 287 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 AC022202.1-201ENST00000613515 211 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 MIR7154-201ENST00000620673 73 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 U4.3-201ENST00000621047 82 ntBASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.54□□□□□ -1.68
SAMD1Q6SPF0 AC131280.1-202ENST00000624067 4211 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 AL356274.2-201ENST00000624379 3752 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 RNU6-1216P-201ENST00000362590 107 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 SNORA3.3-201ENST00000408712 125 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 snoU13.2-201ENST00000459201 104 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 RNU6-977P-201ENST00000516411 103 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 RNA5SP437-201ENST00000517249 129 ntBASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
SAMD1Q6SPF0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 SNORD115-22-201ENST00000364456 82 ntBASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 HLA-N-201ENST00000437516 135 ntBASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 MIR2113-201ENST00000459007 91 ntBASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 AC099513.1-201ENST00000490423 301 ntBASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 UBL5P2-201ENST00000583788 219 ntBASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SAMD1Q6SPF0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 RNY4P3-201ENST00000365254 95 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 SNORA5A-201ENST00000384111 134 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 SNORD116-24-201ENST00000384549 92 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 MIR588-201ENST00000384900 83 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 MIR29C-201ENST00000385231 88 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 RNU1-95P-201ENST00000516357 160 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 RNU1-128P-201ENST00000516704 160 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 AC121758.2-201ENST00000553271 193 ntBASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SAMD1Q6SPF0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 RNU6-669P-201ENST00000365575 107 ntBASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 MIR520A-201ENST00000384862 85 ntBASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 SNORA4-201ENST00000584302 138 ntBASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 AL627230.6-201ENST00000611129 280 ntBASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 AC009093.8-201ENST00000641769 292 ntBASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SAMD1Q6SPF0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 SNORD21-201ENST00000383953 95 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 MIR34B-201ENST00000385076 84 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 MIR1289-1-201ENST00000408836 144 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 SNORD63B-201ENST00000411005 70 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 AL035423.1-201ENST00000420331 213 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 AC244023.1-201ENST00000426884 112 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 CYP4A43P-201ENST00000568156 121 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 AC242498.1-201ENST00000604134 111 ntBASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SAMD1Q6SPF0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 RNU11-3P-201ENST00000391111 133 ntBASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 RN7SKP220-201ENST00000410611 288 ntBASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 IPO8P1-201ENST00000455509 3109 ntBASIC4.48□□□□□ -1.69
SAMD1Q6SPF0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SAMD1Q6SPF0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SAMD1Q6SPF0 MIR424-201ENST00000362227 98 ntBASIC4.47□□□□□ -1.69
SAMD1Q6SPF0 SNORD113.1-201ENST00000363280 73 ntBASIC4.47□□□□□ -1.69
SAMD1Q6SPF0 AC069503.3-201ENST00000618674 145 ntBASIC4.47□□□□□ -1.69
SAMD1Q6SPF0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SAMD1Q6SPF0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 RNU6-461P-201ENST00000364195 107 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 RNA5SP51-201ENST00000364750 119 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 SNORA3C-201ENST00000408792 125 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 RPS29P4-201ENST00000414733 161 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 AC104389.3-201ENST00000445629 235 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms