Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
RFC1P35251 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.45□□□□□ -2.18
RFC1P35251 MIR376A2-201ENST00000636782 80 ntBASIC1.45□□□□□ -2.18
RFC1P35251 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RFC1P35251 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
RFC1P35251 Y_RNA.37-201ENST00000362606 108 ntBASIC1.44□□□□□ -2.18
RFC1P35251 SNORD115-28-201ENST00000363931 81 ntBASIC1.44□□□□□ -2.18
RFC1P35251 Y_RNA.272-201ENST00000364696 102 ntBASIC1.44□□□□□ -2.18
RFC1P35251 RNU6-1336P-201ENST00000383886 109 ntBASIC1.44□□□□□ -2.18
RFC1P35251 Y_RNA.494-201ENST00000384432 111 ntBASIC1.44□□□□□ -2.18
RFC1P35251 RNU6-768P-201ENST00000384683 107 ntBASIC1.44□□□□□ -2.18
RFC1P35251 RNU6-239P-201ENST00000390990 99 ntBASIC1.44□□□□□ -2.18
RFC1P35251 SNORD116-25-201ENST00000516517 92 ntBASIC1.44□□□□□ -2.18
RFC1P35251 AC104465.1-201ENST00000611365 139 ntBASIC1.44□□□□□ -2.18
RFC1P35251 RNU6-818P-201ENST00000364837 108 ntBASIC1.43□□□□□ -2.18
RFC1P35251 Y_RNA.357-201ENST00000365487 109 ntBASIC1.43□□□□□ -2.18
RFC1P35251 SNORD77.3-201ENST00000391113 65 ntBASIC1.43□□□□□ -2.18
RFC1P35251 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
RFC1P35251 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
RFC1P35251 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
RFC1P35251 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.43□□□□□ -2.18
RFC1P35251 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
RFC1P35251 RPL30P7-201ENST00000479312 323 ntBASIC1.43□□□□□ -2.18
RFC1P35251 AC107027.2-201ENST00000512197 115 ntBASIC1.43□□□□□ -2.18
RFC1P35251 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
RFC1P35251 MIR3129-201ENST00000581095 76 ntBASIC1.43□□□□□ -2.18
RFC1P35251 AL365205.2-201ENST00000594586 68 ntBASIC1.43□□□□□ -2.18
RFC1P35251 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
RFC1P35251 MIR3658-201ENST00000636291 56 ntBASIC1.43□□□□□ -2.18
RFC1P35251 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
RFC1P35251 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RFC1P35251 RNU6-1130P-201ENST00000365434 107 ntBASIC1.42□□□□□ -2.18
RFC1P35251 RNU6-597P-201ENST00000365620 102 ntBASIC1.42□□□□□ -2.18
RFC1P35251 RNU6-804P-201ENST00000384286 107 ntBASIC1.42□□□□□ -2.18
RFC1P35251 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RFC1P35251 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
RFC1P35251 RNU6-322P-201ENST00000516010 103 ntBASIC1.42□□□□□ -2.18
RFC1P35251 SNORD36C-201ENST00000516733 66 ntBASIC1.42□□□□□ -2.18
RFC1P35251 AL512310.8-201ENST00000550183 120 ntBASIC1.42□□□□□ -2.18
RFC1P35251 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
RFC1P35251 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
RFC1P35251 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
RFC1P35251 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
RFC1P35251 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
RFC1P35251 RNY1P11-201ENST00000363759 113 ntBASIC1.41□□□□□ -2.18
RFC1P35251 RNU6-1082P-201ENST00000364574 107 ntBASIC1.41□□□□□ -2.18
RFC1P35251 Y_RNA.393-201ENST00000383936 102 ntBASIC1.41□□□□□ -2.18
RFC1P35251 RNU6-209P-201ENST00000384118 107 ntBASIC1.41□□□□□ -2.18
RFC1P35251 RNU2-13P-201ENST00000515909 113 ntBASIC1.41□□□□□ -2.18
RFC1P35251 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
RFC1P35251 MIR3144-201ENST00000579460 79 ntBASIC1.41□□□□□ -2.18
RFC1P35251 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
RFC1P35251 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
RFC1P35251 AL096861.1-201ENST00000610899 123 ntBASIC1.41□□□□□ -2.18
RFC1P35251 AC134878.1-201ENST00000619901 243 ntBASIC1.41□□□□□ -2.18
RFC1P35251 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
RFC1P35251 Y_RNA.337-201ENST00000365312 102 ntBASIC1.4□□□□□ -2.19
RFC1P35251 Y_RNA.521-201ENST00000384560 114 ntBASIC1.4□□□□□ -2.19
RFC1P35251 Y_RNA.542-201ENST00000384641 111 ntBASIC1.4□□□□□ -2.19
RFC1P35251 MIR570-201ENST00000384917 97 ntBASIC1.4□□□□□ -2.19
RFC1P35251 Y_RNA.580-201ENST00000391004 95 ntBASIC1.4□□□□□ -2.19
RFC1P35251 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.4□□□□□ -2.19
RFC1P35251 AC087499.4-201ENST00000448505 178 ntBASIC1.4□□□□□ -2.19
RFC1P35251 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
RFC1P35251 MTND5P41-201ENST00000517498 206 ntBASIC1.4□□□□□ -2.19
RFC1P35251 AP003484.1-201ENST00000530974 250 ntBASIC1.4□□□□□ -2.19
RFC1P35251 MIR4764-201ENST00000580680 88 ntBASIC1.4□□□□□ -2.19
RFC1P35251 AC021753.1-201ENST00000635724 168 ntBASIC1.4□□□□□ -2.19
RFC1P35251 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RFC1P35251 RNU6-1292P-201ENST00000383856 107 ntBASIC1.39□□□□□ -2.19
RFC1P35251 Y_RNA.398-201ENST00000383952 99 ntBASIC1.39□□□□□ -2.19
RFC1P35251 Y_RNA.464-201ENST00000384282 110 ntBASIC1.39□□□□□ -2.19
RFC1P35251 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RPS26P48-201ENST00000491713 339 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU7-41P-201ENST00000515917 61 ntBASIC1.39□□□□□ -2.19
RFC1P35251 SNORA18.4-201ENST00000516440 124 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU6-255P-201ENST00000516957 105 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
RFC1P35251 RNU6-1212P-201ENST00000517023 104 ntBASIC1.39□□□□□ -2.19
RFC1P35251 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
RFC1P35251 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
RFC1P35251 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.39□□□□□ -2.19
RFC1P35251 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RFC1P35251 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RFC1P35251 Y_RNA.370-201ENST00000365589 108 ntBASIC1.38□□□□□ -2.19
RFC1P35251 Y_RNA.410-201ENST00000383992 113 ntBASIC1.38□□□□□ -2.19
RFC1P35251 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
RFC1P35251 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
RFC1P35251 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
RFC1P35251 DNAJC19P2-201ENST00000593340 302 ntBASIC1.38□□□□□ -2.19
RFC1P35251 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
RFC1P35251 Y_RNA.8-201ENST00000362353 102 ntBASIC1.37□□□□□ -2.19
RFC1P35251 Y_RNA.241-201ENST00000364470 117 ntBASIC1.37□□□□□ -2.19
RFC1P35251 Y_RNA.440-201ENST00000384120 114 ntBASIC1.37□□□□□ -2.19
RFC1P35251 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
RFC1P35251 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RFC1P35251 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
RFC1P35251 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms