Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-1031P-201ENST00000384773 107 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 MIR516B2-201ENST00000385190 85 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 AC109327.2-201ENST00000448339 378 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 RPL23AP63-201ENST00000498752 471 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 RNU6-162P-201ENST00000516228 103 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 AC079600.2-201ENST00000550076 130 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 MIR548AE2-201ENST00000583456 67 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 MIR4777-201ENST00000583710 86 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 MIR548Z-201ENST00000584743 97 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.79□□□□□ -1.96
NFKB1P19838 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
NFKB1P19838 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NFKB1P19838 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NFKB1P19838 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
NFKB1P19838 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.78□□□□□ -1.96
NFKB1P19838 Y_RNA.96-201ENST00000363092 109 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNU1-112P-201ENST00000364401 164 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 SNORA24-201ENST00000384096 131 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNU6-1201P-201ENST00000384227 107 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 MIR597-201ENST00000384968 97 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 MIR136-201ENST00000385207 82 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 SNORA26.6-201ENST00000391256 115 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNA5SP261-201ENST00000410536 106 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 MRPL35P3-201ENST00000421557 364 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RPS29P29-201ENST00000456396 171 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 MIR1270-201ENST00000459320 83 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNU2-13P-201ENST00000515909 113 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNU6-1018P-201ENST00000516577 106 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 RNA5SP33-201ENST00000516687 98 ntBASIC2.78□□□□□ -1.96
NFKB1P19838 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.78□□□□□ -1.96
NFKB1P19838 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.77□□□□□ -1.97
NFKB1P19838 Y_RNA.430-201ENST00000384081 110 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 RNU1-148P-201ENST00000384472 162 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 AL451046.2-201ENST00000403074 277 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 RNU7-67P-201ENST00000459003 62 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 RNU6-958P-201ENST00000516995 106 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 DNAJC19P9-201ENST00000555084 351 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 MIR3126-201ENST00000577443 74 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.77□□□□□ -1.97
NFKB1P19838 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.77□□□□□ -1.97
NFKB1P19838 AL137790.1-201ENST00000634283 177 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 AC091304.10-201ENST00000641554 121 ntBASIC2.77□□□□□ -1.97
NFKB1P19838 Y_RNA.95-201ENST00000363079 95 ntBASIC2.76□□□□□ -1.97
NFKB1P19838 AC022137.1-201ENST00000483735 151 ntBASIC2.76□□□□□ -1.97
NFKB1P19838 RNA5SP137-201ENST00000516833 135 ntBASIC2.76□□□□□ -1.97
NFKB1P19838 MIR4513-201ENST00000581077 86 ntBASIC2.76□□□□□ -1.97
NFKB1P19838 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.76□□□□□ -1.97
NFKB1P19838 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NFKB1P19838 RNY1P1-201ENST00000364372 112 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 RNU1-91P-201ENST00000364746 163 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 RNU11-3P-201ENST00000391111 133 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 MIR1283-2-201ENST00000408621 87 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 BTF3P4-201ENST00000418852 495 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 RNU7-73P-201ENST00000458743 63 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 SCARNA16.3-201ENST00000516595 184 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 RNU6-521P-201ENST00000516663 105 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 MIR6717-201ENST00000622747 73 ntBASIC2.75□□□□□ -1.97
NFKB1P19838 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NFKB1P19838 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 RNU6-1190P-201ENST00000410811 104 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 RNU7-34P-201ENST00000459394 64 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 RNA5SP367-201ENST00000516557 118 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 Y_RNA.705-201ENST00000516862 110 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 AL020996.3-201ENST00000606617 222 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 MIR4791-201ENST00000607666 84 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 IGLL4P-201ENST00000614590 133 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 MIR3202-2-201ENST00000635980 79 ntBASIC2.74□□□□□ -1.97
NFKB1P19838 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NFKB1P19838 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NFKB1P19838 RNU6-1313P-201ENST00000362622 102 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 RNU6-228P-201ENST00000362700 106 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 RNU6-675P-201ENST00000384236 104 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 AC093850.1-201ENST00000454121 251 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 Y_RNA.659-201ENST00000515994 113 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
NFKB1P19838 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNU6-1124P-201ENST00000384169 107 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 MIR520A-201ENST00000384862 85 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNU6-913P-201ENST00000390913 95 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 SNORD28B-201ENST00000390993 75 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNA5SP465-201ENST00000391195 109 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNU6-887P-201ENST00000410660 100 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNU7-26P-201ENST00000458980 63 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 SNORD123-201ENST00000459473 70 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 RNVU1-2-201ENST00000516326 135 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 MIR548AR-201ENST00000582191 57 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.72□□□□□ -1.97
NFKB1P19838 AC243994.1-201ENST00000618627 109 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 AC025521.1-201ENST00000621624 286 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 AL513423.1-201ENST00000621695 132 ntBASIC2.72□□□□□ -1.97
NFKB1P19838 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NFKB1P19838 SNORA1.1-201ENST00000364671 133 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 COTL1P1-201ENST00000422309 375 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms