Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 MIR518F-201ENST00000384973 87 ntBASIC1.54□□□□□ -2.16
PEPDP12955 SNORD41-201ENST00000386967 70 ntBASIC1.54□□□□□ -2.16
PEPDP12955 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.54□□□□□ -2.16
PEPDP12955 Y_RNA.662-201ENST00000516028 97 ntBASIC1.54□□□□□ -2.16
PEPDP12955 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
PEPDP12955 MIR4452-201ENST00000583004 71 ntBASIC1.54□□□□□ -2.16
PEPDP12955 RMST_2.1-201ENST00000617263 136 ntBASIC1.54□□□□□ -2.16
PEPDP12955 RNU4-84P-201ENST00000364200 139 ntBASIC1.53□□□□□ -2.16
PEPDP12955 SNORD61-201ENST00000384252 73 ntBASIC1.53□□□□□ -2.16
PEPDP12955 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
PEPDP12955 MIR548O-201ENST00000408583 114 ntBASIC1.53□□□□□ -2.16
PEPDP12955 POLR2J4-204ENST00000418424 324 ntBASIC1.53□□□□□ -2.16
PEPDP12955 RNU2-13P-201ENST00000515909 113 ntBASIC1.53□□□□□ -2.16
PEPDP12955 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
PEPDP12955 SNORD116-25-201ENST00000516517 92 ntBASIC1.53□□□□□ -2.16
PEPDP12955 AC007751.1-201ENST00000529260 376 ntBASIC1.53□□□□□ -2.16
PEPDP12955 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
PEPDP12955 AC134878.1-201ENST00000619901 243 ntBASIC1.53□□□□□ -2.16
PEPDP12955 Y_RNA.91-201ENST00000363042 107 ntBASIC1.52□□□□□ -2.17
PEPDP12955 Y_RNA.180-201ENST00000363867 113 ntBASIC1.52□□□□□ -2.17
PEPDP12955 SNORD115-28-201ENST00000363931 81 ntBASIC1.52□□□□□ -2.17
PEPDP12955 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
PEPDP12955 Y_RNA.370-201ENST00000365589 108 ntBASIC1.52□□□□□ -2.17
PEPDP12955 RNU6-886P-201ENST00000384319 105 ntBASIC1.52□□□□□ -2.17
PEPDP12955 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PEPDP12955 RNU6-239P-201ENST00000390990 99 ntBASIC1.52□□□□□ -2.17
PEPDP12955 Y_RNA.622-201ENST00000411091 108 ntBASIC1.52□□□□□ -2.17
PEPDP12955 AC107027.2-201ENST00000512197 115 ntBASIC1.52□□□□□ -2.17
PEPDP12955 Y_RNA.666-201ENST00000516187 112 ntBASIC1.52□□□□□ -2.17
PEPDP12955 MIR3646-201ENST00000578301 84 ntBASIC1.52□□□□□ -2.17
PEPDP12955 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
PEPDP12955 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
PEPDP12955 Y_RNA.580-201ENST00000391004 95 ntBASIC1.51□□□□□ -2.17
PEPDP12955 PCNPP3-201ENST00000393579 471 ntBASIC1.51□□□□□ -2.17
PEPDP12955 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
PEPDP12955 RNU6-1212P-201ENST00000517023 104 ntBASIC1.51□□□□□ -2.17
PEPDP12955 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
PEPDP12955 MIR6515-201ENST00000619843 57 ntBASIC1.51□□□□□ -2.17
PEPDP12955 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.51□□□□□ -2.17
PEPDP12955 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PEPDP12955 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-34-201ENST00000362441 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-12-201ENST00000362583 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-29-201ENST00000362834 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-9-201ENST00000362912 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-21-201ENST00000362963 81 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-14-201ENST00000363090 81 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-13-201ENST00000363358 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-41-201ENST00000363608 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-11-201ENST00000363616 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-5-201ENST00000363633 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-39-201ENST00000363694 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-4-201ENST00000363810 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-16-201ENST00000363887 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-6-201ENST00000363942 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-42-201ENST00000364273 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-15-201ENST00000364809 81 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-1-201ENST00000364961 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-26-201ENST00000365067 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-10-201ENST00000365073 81 ntBASIC1.5□□□□□ -2.17
PEPDP12955 Y_RNA.337-201ENST00000365312 102 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-43-201ENST00000365503 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-36-201ENST00000365629 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORA24-201ENST00000384096 131 ntBASIC1.5□□□□□ -2.17
PEPDP12955 Y_RNA.464-201ENST00000384282 110 ntBASIC1.5□□□□□ -2.17
PEPDP12955 Y_RNA.537-201ENST00000384626 109 ntBASIC1.5□□□□□ -2.17
PEPDP12955 U8.17-201ENST00000391292 132 ntBASIC1.5□□□□□ -2.17
PEPDP12955 MIR548I3-201ENST00000408378 149 ntBASIC1.5□□□□□ -2.17
PEPDP12955 MIR1276-201ENST00000408707 83 ntBASIC1.5□□□□□ -2.17
PEPDP12955 MIR548I1-201ENST00000408810 149 ntBASIC1.5□□□□□ -2.17
PEPDP12955 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
PEPDP12955 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.5□□□□□ -2.17
PEPDP12955 SNORD123-201ENST00000459473 70 ntBASIC1.5□□□□□ -2.17
PEPDP12955 RNU6-693P-201ENST00000516134 107 ntBASIC1.5□□□□□ -2.17
PEPDP12955 RNU6-861P-201ENST00000516745 106 ntBASIC1.5□□□□□ -2.17
PEPDP12955 AL512310.8-201ENST00000550183 120 ntBASIC1.5□□□□□ -2.17
PEPDP12955 SNORD115-40-201ENST00000606510 82 ntBASIC1.5□□□□□ -2.17
PEPDP12955 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
PEPDP12955 RNU6-1067P-201ENST00000384752 107 ntBASIC1.49□□□□□ -2.17
PEPDP12955 MIR624-201ENST00000385217 97 ntBASIC1.49□□□□□ -2.17
PEPDP12955 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
PEPDP12955 SNORA40.5-201ENST00000391061 128 ntBASIC1.49□□□□□ -2.17
PEPDP12955 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
PEPDP12955 AP1B1P2-201ENST00000416196 106 ntBASIC1.49□□□□□ -2.17
PEPDP12955 MTND5P15-201ENST00000434246 349 ntBASIC1.49□□□□□ -2.17
PEPDP12955 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
PEPDP12955 AC022559.1-201ENST00000520905 205 ntBASIC1.49□□□□□ -2.17
PEPDP12955 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
PEPDP12955 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PEPDP12955 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
PEPDP12955 Y_RNA.37-201ENST00000362606 108 ntBASIC1.48□□□□□ -2.17
PEPDP12955 Y_RNA.357-201ENST00000365487 109 ntBASIC1.48□□□□□ -2.17
PEPDP12955 Y_RNA.393-201ENST00000383936 102 ntBASIC1.48□□□□□ -2.17
PEPDP12955 RNU6-342P-201ENST00000384521 104 ntBASIC1.48□□□□□ -2.17
PEPDP12955 RNU6-394P-201ENST00000410735 107 ntBASIC1.48□□□□□ -2.17
PEPDP12955 RNU6-938P-201ENST00000411285 103 ntBASIC1.48□□□□□ -2.17
PEPDP12955 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
PEPDP12955 AC106754.2-201ENST00000623006 233 ntBASIC1.48□□□□□ -2.17
PEPDP12955 Y_RNA.205-201ENST00000364128 113 ntBASIC1.47□□□□□ -2.17
PEPDP12955 MIR516B2-201ENST00000385190 85 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms