Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORA70.25-201ENST00000612741 95 ntBASIC-0.93□□□□□ -2.56
TPM1P09493 MIR148A-201ENST00000362215 68 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 MIR196A2-201ENST00000385189 110 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 RNU4-30P-201ENST00000410245 143 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 MTND3P10-201ENST00000450967 341 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 RNU7-96P-201ENST00000459535 64 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 RNU6-897P-201ENST00000517135 105 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 MIR378D2-201ENST00000580636 98 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 MIR4677-201ENST00000584153 80 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.94□□□□□ -2.56
TPM1P09493 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 RPS3AP52-201ENST00000435639 297 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.95□□□□□ -2.56
TPM1P09493 AC109635.3-201ENST00000529536 185 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 AL162376.1-201ENST00000624117 175 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 AL596211.1-201ENST00000569873 2277 ntBASIC-0.95□□□□□ -2.56
TPM1P09493 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 RPL21P38-201ENST00000418090 167 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 RNU6-998P-201ENST00000515894 101 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 FTX_2.1-201ENST00000618816 94 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 AL109933.3-201ENST00000619095 188 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 MIR4788-201ENST00000639104 80 ntBASIC-0.96□□□□□ -2.56
TPM1P09493 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 RNU6-726P-201ENST00000364680 107 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 MIR548K-201ENST00000408406 116 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 AC096949.1-201ENST00000412047 152 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 AC122108.2-201ENST00000611946 526 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 MIR8064-201ENST00000612863 90 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 PISRT1.1-201ENST00000616930 107 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 MIR6717-201ENST00000622747 73 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 AL162726.3-218ENST00000636401 95 ntBASIC-0.97□□□□□ -2.56
TPM1P09493 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 SNORA22B-201ENST00000383876 138 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 MTND1P1-201ENST00000445453 368 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 SNORD36C-201ENST00000516733 66 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 MIR4423-201ENST00000580922 80 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 MIR4645-201ENST00000583158 77 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 MIR4263-201ENST00000584745 83 ntBASIC-0.98□□□□□ -2.57
TPM1P09493 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 SNORD81.1-201ENST00000363064 77 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 RNU6-653P-201ENST00000363074 106 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 SNORA72.4-201ENST00000384174 132 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 MIR329-2-201ENST00000385029 84 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 SNORA26.6-201ENST00000391256 115 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 MIR548F5-201ENST00000408421 86 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 AC109327.2-201ENST00000448339 378 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 TRBVB-201ENST00000477100 408 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.99□□□□□ -2.57
TPM1P09493 RNU2-31P-201ENST00000516954 155 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 IGLVI-20-201ENST00000519296 130 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 MIR3908-201ENST00000579798 126 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.99□□□□□ -2.57
TPM1P09493 Y_RNA.482-201ENST00000384377 111 ntBASIC-1□□□□□ -2.57
TPM1P09493 RNU2-14P-201ENST00000411053 191 ntBASIC-1□□□□□ -2.57
TPM1P09493 RNU6-284P-201ENST00000411105 106 ntBASIC-1□□□□□ -2.57
TPM1P09493 RPS29P25-201ENST00000481709 171 ntBASIC-1□□□□□ -2.57
TPM1P09493 AC144568.1-201ENST00000520139 137 ntBASIC-1□□□□□ -2.57
TPM1P09493 TPTEP1-208ENST00000636884 213 ntBASIC-1□□□□□ -2.57
TPM1P09493 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 MIR489-201ENST00000384923 84 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 MIR548L-201ENST00000408303 86 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 RNU6-693P-201ENST00000516134 107 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 AC141846.1-201ENST00000568348 142 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 AC015540.1-201ENST00000615828 501 ntBASIC-1.01□□□□□ -2.57
TPM1P09493 SNORD114-31-201ENST00000363219 75 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 SNORD114-28-201ENST00000363610 72 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 RNA5SP261-201ENST00000410536 106 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.02□□□□□ -2.57
TPM1P09493 RNU7-4P-201ENST00000516961 62 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 MIR4760-201ENST00000585040 80 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 AL021707.8-201ENST00000609428 183 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.02□□□□□ -2.57
TPM1P09493 MIR548AZ-201ENST00000616567 95 ntBASIC-1.02□□□□□ -2.57
TPM1P09493 MIR548A2-201ENST00000384956 97 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 SNORA25.16-201ENST00000516741 121 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 MIR3145-201ENST00000580727 82 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 AC063944.3-201ENST00000609969 533 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 uc_338.28-201ENST00000612082 187 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 uc_338.36-201ENST00000622331 158 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 AC078883.4-201ENST00000623218 367 ntBASIC-1.03□□□□□ -2.57
TPM1P09493 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 RNA5SP245-201ENST00000364239 121 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 SNORA32.3-201ENST00000384772 121 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 AL160004.2-201ENST00000432935 350 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 711.9 ms