Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Y_RNA.357-201ENST00000365487 109 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 Y_RNA.542-201ENST00000384641 111 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 MT-TR-201ENST00000387439 65 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 SNORD28B-201ENST00000390993 75 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 RNU6-1135P-201ENST00000411083 103 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIC3O60481 AC087499.4-201ENST00000448505 178 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
ZIC3O60481 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
ZIC3O60481 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 Y_RNA.337-201ENST00000365312 102 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 RNU6-597P-201ENST00000365620 102 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 Y_RNA.393-201ENST00000383936 102 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 SNORD77.3-201ENST00000391113 65 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 RNU7-43P-201ENST00000516554 64 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 AL357312.1-201ENST00000603879 298 ntBASIC1.33□□□□□ -2.2
ZIC3O60481 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ZIC3O60481 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 Y_RNA.180-201ENST00000363867 113 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 Y_RNA.272-201ENST00000364696 102 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 RNU6-1292P-201ENST00000383856 107 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 Y_RNA.410-201ENST00000383992 113 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 Y_RNA.494-201ENST00000384432 111 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 Y_RNA.521-201ENST00000384560 114 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 RNU6-768P-201ENST00000384683 107 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ZIC3O60481 MIR548I3-201ENST00000408378 149 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 MIR548I1-201ENST00000408810 149 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 RNU6-394P-201ENST00000410735 107 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 RNU2-13P-201ENST00000515909 113 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 AP003484.1-201ENST00000530974 250 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 MIR4764-201ENST00000580680 88 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 MIR3129-201ENST00000581095 76 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 AL096861.1-201ENST00000610899 123 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ZIC3O60481 AL121890.5-201ENST00000620848 304 ntBASIC1.32□□□□□ -2.2
ZIC3O60481 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.32□□□□□ -2.2
ZIC3O60481 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ZIC3O60481 SNORA1.2-201ENST00000365189 134 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 MIR520C-201ENST00000385005 87 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.31□□□□□ -2.2
ZIC3O60481 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 RPS26P48-201ENST00000491713 339 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 MIR376A2-201ENST00000636782 80 ntBASIC1.31□□□□□ -2.2
ZIC3O60481 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORA25.7-201ENST00000364375 127 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 RNU6-1189P-201ENST00000383958 107 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 Y_RNA.580-201ENST00000391004 95 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORA40.5-201ENST00000391061 128 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 snoU13.25-201ENST00000458945 104 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIC3O60481 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORA18.4-201ENST00000516440 124 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
ZIC3O60481 MIR3192-201ENST00000584920 77 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 SNORD115-40-201ENST00000606510 82 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIC3O60481 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ZIC3O60481 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
ZIC3O60481 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
ZIC3O60481 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ZIC3O60481 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
ZIC3O60481 Y_RNA.241-201ENST00000364470 117 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 RNU6-1336P-201ENST00000383886 109 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 Y_RNA.440-201ENST00000384120 114 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms