Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PITPNM1O00562 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
PITPNM1O00562 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
PITPNM1O00562 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PITPNM1O00562 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RNU6-382P-201ENST00000365181 106 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 MIR563-201ENST00000385080 79 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 MIR519A1-201ENST00000385257 85 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RNA5SP299-201ENST00000391203 116 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 SNORA11.2-201ENST00000408318 127 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RNU6-1052P-201ENST00000411398 104 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RNU7-195P-201ENST00000458793 62 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RNU6-719P-201ENST00000516671 104 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.11□□□□□ -1.75
PITPNM1O00562 AL591424.2-201ENST00000617023 128 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 MIR4727-201ENST00000622232 55 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 MIR3651-201ENST00000630427 90 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 U6.100-201ENST00000636230 99 ntBASIC4.11□□□□□ -1.75
PITPNM1O00562 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PITPNM1O00562 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PITPNM1O00562 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PITPNM1O00562 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PITPNM1O00562 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PITPNM1O00562 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.1□□□□□ -1.75
PITPNM1O00562 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.1□□□□□ -1.75
PITPNM1O00562 RNA5SP50-201ENST00000363731 107 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 MIR588-201ENST00000384900 83 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 MIR634-201ENST00000385208 97 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 RNU6-92P-201ENST00000605893 104 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 AC110079.1-202ENST00000635213 138 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PITPNM1O00562 AC023934.1-201ENST00000574529 2389 ntBASIC4.1□□□□□ -1.75
PITPNM1O00562 RNU4-58P-201ENST00000363192 141 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 RNU6-461P-201ENST00000364195 107 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 RNU6-53P-201ENST00000365367 106 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 MIR490-201ENST00000384865 128 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 MIR520C-201ENST00000385005 87 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 MIR451A-201ENST00000385059 72 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 MIR513A2-201ENST00000385249 127 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.09□□□□□ -1.75
PITPNM1O00562 AC023141.11-201ENST00000508864 202 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PITPNM1O00562 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.09□□□□□ -1.75
PITPNM1O00562 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.09□□□□□ -1.76
PITPNM1O00562 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.09□□□□□ -1.76
PITPNM1O00562 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
PITPNM1O00562 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.76
PITPNM1O00562 AC244023.1-201ENST00000426884 112 ntBASIC4.08□□□□□ -1.76
PITPNM1O00562 RNA5SP445-201ENST00000515889 115 ntBASIC4.08□□□□□ -1.76
PITPNM1O00562 RNU6-531P-201ENST00000516694 104 ntBASIC4.08□□□□□ -1.76
PITPNM1O00562 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
PITPNM1O00562 AC242498.1-201ENST00000604134 111 ntBASIC4.08□□□□□ -1.76
PITPNM1O00562 U4.6-201ENST00000621618 127 ntBASIC4.08□□□□□ -1.76
PITPNM1O00562 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PITPNM1O00562 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PITPNM1O00562 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PITPNM1O00562 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
PITPNM1O00562 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PITPNM1O00562 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PITPNM1O00562 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PITPNM1O00562 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PITPNM1O00562 SNORD9-201ENST00000362566 104 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 RNU6-1260P-201ENST00000362944 107 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
PITPNM1O00562 AC011753.1-201ENST00000451001 220 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 SCARNA16.3-201ENST00000516595 184 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 MIR7851-201ENST00000610611 160 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 SCARNA4.1-201ENST00000628597 123 ntBASIC4.07□□□□□ -1.76
PITPNM1O00562 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.07□□□□□ -1.76
PITPNM1O00562 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PITPNM1O00562 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PITPNM1O00562 RNA5SP424-201ENST00000390988 115 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 RNU2-37P-201ENST00000410695 177 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 SNORA71B-202ENST00000439232 272 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 RPS29P12-201ENST00000460178 152 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 Y_RNA.809-201ENST00000516058 95 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 AL162274.2-201ENST00000614406 332 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 AP000553.6-201ENST00000641242 118 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 AC073869.9-201ENST00000641610 120 ntBASIC4.06□□□□□ -1.76
PITPNM1O00562 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PITPNM1O00562 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PITPNM1O00562 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PITPNM1O00562 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PITPNM1O00562 TRAJ51-201ENST00000504127 63 ntBASIC4.05□□□□□ -1.76
PITPNM1O00562 SNORA9.3-201ENST00000516383 129 ntBASIC4.05□□□□□ -1.76
PITPNM1O00562 AL137849.1-201ENST00000604767 169 ntBASIC4.05□□□□□ -1.76
PITPNM1O00562 AC021506.2-201ENST00000612354 169 ntBASIC4.05□□□□□ -1.76
PITPNM1O00562 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PITPNM1O00562 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PITPNM1O00562 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PITPNM1O00562 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PITPNM1O00562 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PITPNM1O00562 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PITPNM1O00562 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
PITPNM1O00562 MIR30D-201ENST00000362283 70 ntBASIC4.04□□□□□ -1.76
PITPNM1O00562 SNORD60.1-201ENST00000362451 73 ntBASIC4.04□□□□□ -1.76
PITPNM1O00562 Y_RNA.258-201ENST00000364613 105 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 255.7 ms