Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORD116-22-201ENST00000384430 92 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU6-972P-201ENST00000391208 107 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU6-1186P-201ENST00000410429 97 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP344-201ENST00000411081 104 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 AL161651.1-201ENST00000440882 223 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU7-123P-201ENST00000515911 60 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 SCARNA15-202ENST00000516881 127 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 HSPE1P7-201ENST00000604681 321 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 MIR6895-201ENST00000613497 78 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 U6.73-201ENST00000619194 103 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-486P-201ENST00000363116 107 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 SNORD32B-201ENST00000364460 84 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-418P-201ENST00000384035 107 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 SNORA48.3-201ENST00000391081 134 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AC019129.1-201ENST00000403786 261 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.607-201ENST00000410597 98 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AC096949.1-201ENST00000412047 152 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 MRPL35P3-201ENST00000421557 364 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 CALM2P4-201ENST00000430810 426 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AC113410.1-201ENST00000505029 247 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU2-35P-201ENST00000516446 142 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 MIR4765-201ENST00000585007 77 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 snoU2-30.2-201ENST00000362805 70 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-442P-201ENST00000383968 104 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-1104P-201ENST00000384723 104 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AC098934.3-201ENST00000430450 190 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP220-201ENST00000516298 104 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 RNU6-948P-201ENST00000516374 107 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.714-201ENST00000517065 90 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 SNRPGP19-201ENST00000603826 189 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AL137847.3-201ENST00000611521 109 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 U7.3-201ENST00000616123 62 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 AC091304.10-201ENST00000641554 121 ntBASIC1.55□□□□□ -2.16
NOTCH3Q9UM47 MAPK10-266ENST00000641066 6555 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 SNORD115-35-201ENST00000365122 82 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 SNORD21-201ENST00000383953 95 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP467-201ENST00000391274 118 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AL451046.2-201ENST00000403074 277 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP310-201ENST00000459084 116 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RPL23AP63-201ENST00000498752 471 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNU6-857P-201ENST00000515893 110 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC079598.5-201ENST00000547460 117 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 MIR3609-201ENST00000582661 80 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC087741.2-201ENST00000619415 172 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC090517.3-201ENST00000625170 141 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNU6-1084P-201ENST00000362498 107 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 SNORD68-201ENST00000363214 84 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.351-201ENST00000365436 96 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNY1P6-201ENST00000384193 109 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 U8.15-201ENST00000390947 134 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 SNORA26.7-201ENST00000391288 122 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 HSPE1P26-201ENST00000405341 275 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC016909.1-201ENST00000415916 166 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC097463.2-201ENST00000421074 142 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC003989.2-201ENST00000440224 169 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNU7-25P-201ENST00000516544 62 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RNU7-70P-201ENST00000516941 66 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 SCARNA3-201ENST00000517097 143 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 IGLV3-17-201ENST00000519099 244 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 AC004812.1-201ENST00000540773 146 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.783-201ENST00000613546 102 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 RMST_2.1-201ENST00000617263 136 ntBASIC1.54□□□□□ -2.16
NOTCH3Q9UM47 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 AC018630.2-201ENST00000534866 2403 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.10-201ENST00000362371 110 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.298-201ENST00000364960 107 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 RNU6-342P-201ENST00000384521 104 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 U8.17-201ENST00000391292 132 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 HMGN1P7-201ENST00000491722 313 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 RNU1-61P-201ENST00000516107 151 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.681-201ENST00000516445 113 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 AC103810.1-201ENST00000579873 453 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 MIR3163-201ENST00000581592 73 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 AC006441.5-201ENST00000612680 209 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.53□□□□□ -2.16
NOTCH3Q9UM47 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.53□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 513.4 ms