Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 SNORD33-201ENST00000362761 85 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 RNY1P11-201ENST00000363759 113 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 SNORA4.2-201ENST00000365313 147 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.400-201ENST00000383963 111 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 RNU6-203P-201ENST00000384038 104 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AC233266.1-201ENST00000454518 96 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 RNU7-94P-201ENST00000459576 63 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AC107027.2-201ENST00000512197 115 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AP002004.2-201ENST00000531656 154 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 MIR4762-201ENST00000585261 75 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AC242852.1-201ENST00000612151 96 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.778-201ENST00000620203 90 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AC244015.1-201ENST00000622301 99 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 MTND1P7-201ENST00000632801 297 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
DDX43Q9NXZ2 AL157777.2-201ENST00000258070 137 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.91-201ENST00000363042 107 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU6-704P-201ENST00000364162 103 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.215-201ENST00000364204 112 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 SNORD113-1-201ENST00000365321 69 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU6-768P-201ENST00000384683 107 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 MIR522-201ENST00000385071 87 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 MIR569-201ENST00000385228 96 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU6-131P-201ENST00000391144 107 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU11-5P-201ENST00000391216 129 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 AC006461.1-201ENST00000412637 326 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU7-197P-201ENST00000458836 62 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU6-197P-201ENST00000516680 100 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU7-149P-201ENST00000516739 59 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 AC008507.4-201ENST00000585464 127 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 DNAJC19P2-201ENST00000593340 302 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
DDX43Q9NXZ2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.66-201ENST00000362862 102 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 RNU6-151P-201ENST00000364158 107 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 U8.5-201ENST00000364528 136 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.634-201ENST00000364811 113 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.432-201ENST00000384087 111 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.486-201ENST00000384398 107 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 MIR613-201ENST00000385248 95 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 SNORD72-201ENST00000390994 80 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 AC245047.3-201ENST00000429428 127 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 SNRPGP10-201ENST00000432323 225 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 OR9P1P-201ENST00000496431 281 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 RNA5SP153-201ENST00000516498 76 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 MIR8054-201ENST00000620877 86 ntBASIC1.53□□□□□ -2.16
DDX43Q9NXZ2 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.17
DDX43Q9NXZ2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 MIRLET7C-201ENST00000362160 84 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.337-201ENST00000365312 102 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 RNU6-597P-201ENST00000365620 102 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.393-201ENST00000383936 102 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.568-201ENST00000384742 113 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 SNRPGP14-201ENST00000435400 219 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 SNRPGP13-201ENST00000442212 177 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 AC009474.2-201ENST00000451383 136 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1299P-201ENST00000516316 100 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 MIR378D2-201ENST00000580636 98 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 AC120024.3-201ENST00000603167 156 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 JPX_2.1-201ENST00000614161 69 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 AL121890.5-201ENST00000620848 304 ntBASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
DDX43Q9NXZ2 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 MIR499A-201ENST00000384903 122 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 RNU6-440P-201ENST00000390882 105 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 RNU6-426P-201ENST00000516464 97 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 MIR3646-201ENST00000578301 84 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 Pinc.1-201ENST00000616452 154 ntBASIC1.51□□□□□ -2.17
DDX43Q9NXZ2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1082P-201ENST00000364574 107 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 SNORD50B-201ENST00000364995 70 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 RNU4-11P-201ENST00000365287 132 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 RNU6-81P-201ENST00000365608 104 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 MIR548A2-201ENST00000384956 97 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 RNA5SP272-201ENST00000516095 111 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 RNU6-789P-201ENST00000517105 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms