Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORA38.1-201ENST00000364172 131 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 RNU6-296P-201ENST00000384608 107 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 MIR516B2-201ENST00000385190 85 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 MIR1267-201ENST00000408723 78 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 AL035398.1-201ENST00000430869 322 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 AC069257.2-201ENST00000441819 155 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 AC113410.1-201ENST00000505029 247 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 MIR1255B1-201ENST00000636325 63 ntBASIC2.54□□□□□ -2
SSU72Q9NP77 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
SSU72Q9NP77 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SSU72Q9NP77 Y_RNA.171-201ENST00000363760 102 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 SNORA48.1-201ENST00000390879 135 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 HMGN2P39-201ENST00000398005 273 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 SNORA11.1-201ENST00000408133 129 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 RNY4P29-201ENST00000410801 97 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 RNU2-13P-201ENST00000515909 113 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
SSU72Q9NP77 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSU72Q9NP77 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
SSU72Q9NP77 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
SSU72Q9NP77 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSU72Q9NP77 MIR302B-201ENST00000362188 73 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 SNORD115-19-201ENST00000363098 82 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 SNORD115-18-201ENST00000363293 82 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 RNU6-1099P-201ENST00000363533 107 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 RNU6-112P-201ENST00000363599 104 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 SNORD115-17-201ENST00000364612 82 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 Y_RNA.466-201ENST00000384294 113 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 RNVU1-14-201ENST00000384770 164 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 MIR23A-201ENST00000385245 73 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 SNORA26.6-201ENST00000391256 115 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 RPL39P25-201ENST00000449384 154 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 MIR1270-201ENST00000459320 83 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 RNU6-970P-201ENST00000516312 107 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 AL513534.2-201ENST00000603836 250 ntBASIC2.52□□□□□ -2.01
SSU72Q9NP77 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSU72Q9NP77 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSU72Q9NP77 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-661P-201ENST00000362409 107 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 MIR526A1-201ENST00000384897 85 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-1319P-201ENST00000390855 104 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-747P-201ENST00000390928 104 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 SNORD28B-201ENST00000390993 75 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-241P-201ENST00000391148 104 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 MIR1912-201ENST00000410389 80 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNA5SP501-201ENST00000410990 112 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-177P-201ENST00000411257 104 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 AC087499.2-201ENST00000432861 149 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 AL353813.1-201ENST00000440700 253 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RPL23AP63-201ENST00000498752 471 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 RNU6-844P-201ENST00000517175 102 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.51□□□□□ -2.01
SSU72Q9NP77 AC021506.2-201ENST00000612354 169 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 AL442128.1-201ENST00000615151 90 ntBASIC2.51□□□□□ -2.01
SSU72Q9NP77 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SSU72Q9NP77 SNORA24-201ENST00000384096 131 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 SNORA9-201ENST00000384215 133 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 RNU6-1190P-201ENST00000410811 104 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 AL022718.1-201ENST00000412004 84 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 RPS3AP1-201ENST00000413190 320 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 RPL23AP83-201ENST00000434984 473 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 MIR548AR-201ENST00000582191 57 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 MIR6841-201ENST00000637129 72 ntBASIC2.5□□□□□ -2.01
SSU72Q9NP77 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SSU72Q9NP77 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSU72Q9NP77 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.49□□□□□ -2.01
SSU72Q9NP77 SNORD115-2-201ENST00000362842 82 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 RNU6-363P-201ENST00000362895 105 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 Y_RNA.93-201ENST00000363066 109 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 SNORD115-20-201ENST00000365099 82 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 Y_RNA.342-201ENST00000365352 113 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 SNORA70.4-201ENST00000365509 134 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 Y_RNA.370-201ENST00000365589 108 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 Y_RNA.470-201ENST00000384307 117 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 RNU6-950P-201ENST00000384651 107 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 Y_RNA.558-201ENST00000384685 113 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 MIR520A-201ENST00000384862 85 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.49□□□□□ -2.01
SSU72Q9NP77 UBL5P3-201ENST00000475112 231 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 AC007179.3-201ENST00000604976 235 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 MALAT1.1-201ENST00000618249 95 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.49□□□□□ -2.01
SSU72Q9NP77 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSU72Q9NP77 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSU72Q9NP77 SNORD56.5-201ENST00000364281 72 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 MIR452-201ENST00000385020 85 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 RNU6-913P-201ENST00000390913 95 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.48□□□□□ -2.01
SSU72Q9NP77 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 DEFB131E-201ENST00000532329 154 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms