Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.01□□□□□ -2.41
LRRC40Q9H9A6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 RNU6-490P-201ENST00000362985 107 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 MIR193B-201ENST00000384907 83 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 RNU2-14P-201ENST00000411053 191 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 MTATP6P26-201ENST00000445926 662 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 AC023449.1-201ENST00000454464 154 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 AC112693.2-201ENST00000556538 232 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 AC005357.1-201ENST00000588399 301 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 AC133104.2-201ENST00000615272 193 ntBASIC-0.02□□□□□ -2.41
LRRC40Q9H9A6 SNORA42.1-201ENST00000363515 137 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 MIR613-201ENST00000385248 95 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 RNU7-73P-201ENST00000458743 63 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 RNU6-448P-201ENST00000517052 107 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 AC022306.2-201ENST00000617563 647 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 AC073869.6-201ENST00000640656 341 ntBASIC-0.03□□□□□ -2.41
LRRC40Q9H9A6 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 SNORA36.1-201ENST00000363424 132 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 SNORA72.4-201ENST00000384174 132 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 RNY1P4-201ENST00000384595 115 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 AC133485.4-201ENST00000561835 220 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 MIR8055-201ENST00000610739 97 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 Z97988.1-201ENST00000637697 135 ntBASIC-0.04□□□□□ -2.42
LRRC40Q9H9A6 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNA5SP214-201ENST00000363378 118 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNU6-801P-201ENST00000364087 105 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNU6-21P-201ENST00000384710 107 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 MIR559-201ENST00000385188 96 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNU6-913P-201ENST00000390913 95 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNU2-59P-201ENST00000410482 191 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 MTCO1P5-201ENST00000433573 344 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 RNU6-699P-201ENST00000517081 110 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 AC022140.2-201ENST00000623500 188 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
LRRC40Q9H9A6 SNORD116-4-201ENST00000384733 96 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 RNU4-30P-201ENST00000410245 143 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 FCF1P9-201ENST00000412546 282 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 PDCL2P1-201ENST00000419302 352 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 SEPT7P4-201ENST00000437076 306 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 snoU13.2-201ENST00000459201 104 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 RNU6-559P-201ENST00000516151 98 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 RNU7-53P-201ENST00000516705 60 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 RNU7-149P-201ENST00000516739 59 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 AP000942.4-201ENST00000604811 241 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 MIR6755-201ENST00000619993 66 ntBASIC-0.06□□□□□ -2.42
LRRC40Q9H9A6 MIR330-201ENST00000362196 94 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 AC087499.4-201ENST00000448505 178 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 RNU4-77P-201ENST00000516692 156 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 MIR1273G-201ENST00000577677 100 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
LRRC40Q9H9A6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 SNORD115-28-201ENST00000363931 81 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 SNORA1.1-201ENST00000364671 133 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 SNORA40.5-201ENST00000391061 128 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 HMGN1P33-201ENST00000432945 451 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 MTND1P34-201ENST00000438556 671 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 RNU6-469P-201ENST00000516253 101 ntBASIC-0.08□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 RNU4-80P-201ENST00000363200 141 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 SNORD81.2-201ENST00000365153 76 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 SNORA26.5-201ENST00000391215 123 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 RNU6-602P-201ENST00000411155 105 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 POLR2KP2-201ENST00000438155 177 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 RPS29P30-201ENST00000600975 111 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 AC113139.1-201ENST00000605049 239 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 AC025253.1-201ENST00000613623 543 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 MIR4272-201ENST00000635924 64 ntBASIC-0.09□□□□□ -2.42
LRRC40Q9H9A6 RNU6-899P-201ENST00000363947 107 ntBASIC-0.1□□□□□ -2.43
LRRC40Q9H9A6 RNY3-201ENST00000365484 102 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms