Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 SNORD115-36-201ENST00000365629 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 RNU1-109P-201ENST00000383960 147 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-970P-201ENST00000516312 107 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 RNA5SP481-201ENST00000516814 122 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SUB1P4-201ENST00000566062 339 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 AC002984.1-201ENST00000591692 448 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-40-201ENST00000606510 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 MIR342-201ENST00000362212 99 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-833P-201ENST00000363486 107 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-640P-201ENST00000363693 105 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 MIR1302-4-201ENST00000408701 150 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 AC015922.2-201ENST00000435593 184 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-998P-201ENST00000515894 101 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 SNORA31.10-201ENST00000516482 106 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 AC090821.2-201ENST00000523552 176 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
TRIM56Q9BRZ2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 Y_RNA.78-201ENST00000362970 110 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 RNA5SP184-201ENST00000411071 108 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 RN7SKP132-201ENST00000516001 208 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 MIR4529-201ENST00000578110 78 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 Y_RNA.818-201ENST00000618813 71 ntBASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM56Q9BRZ2 AL442644.1-201ENST00000454390 3105 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 RNU4-16P-201ENST00000364737 141 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 SNORA1.2-201ENST00000365189 134 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 Y_RNA.344-201ENST00000365381 112 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 MT-TI-201ENST00000387365 69 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 MIR1267-201ENST00000408723 78 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 HSPE1P9-201ENST00000440046 311 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 AC107297.1-201ENST00000459991 176 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 MIR4319-201ENST00000577285 85 ntBASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM56Q9BRZ2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 SNORA51.10-201ENST00000384418 136 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-1104P-201ENST00000384723 104 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 MIR1912-201ENST00000410389 80 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 AL022718.1-201ENST00000412004 84 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 AC087499.2-201ENST00000432861 149 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 RNVU1-2-201ENST00000516326 135 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 RNU2-35P-201ENST00000516446 142 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 AC022523.2-201ENST00000561045 150 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 AL162726.3-218ENST00000636401 95 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.67□□□□□ -1.98
TRIM56Q9BRZ2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 SNORA70.7-201ENST00000384159 133 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 MIR452-201ENST00000385020 85 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 U8.16-201ENST00000391279 133 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 RNU2-7P-201ENST00000410794 178 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 RPL39P25-201ENST00000449384 154 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 RNA5SP168-201ENST00000516642 112 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 SNORD14A-201ENST00000606526 91 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 MIR2052-201ENST00000636055 55 ntBASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM56Q9BRZ2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TRIM56Q9BRZ2 RNU6-112P-201ENST00000363599 104 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP144-201ENST00000410846 116 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP501-201ENST00000410990 112 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-893P-201ENST00000458841 100 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNU7-12P-201ENST00000516030 62 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNU7-6P-201ENST00000516845 62 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-158P-201ENST00000517104 100 ntBASIC2.65□□□□□ -1.99
TRIM56Q9BRZ2 MIR590-201ENST00000385008 97 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 AC108938.1-201ENST00000451204 136 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 SNORA31.25-201ENST00000517242 134 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 AC141557.1-201ENST00000540982 400 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 HSPE1P19-201ENST00000603327 295 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 AL513423.1-201ENST00000621695 132 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 AC021613.1-201ENST00000623880 111 ntBASIC2.64□□□□□ -1.99
TRIM56Q9BRZ2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-294P-201ENST00000364999 102 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-296P-201ENST00000384608 107 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 UBL5P3-201ENST00000475112 231 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 RPL23AP63-201ENST00000498752 471 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms