Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNU6-595P-201ENST00000363944 107 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-128P-201ENST00000383976 107 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 SNORD77.3-201ENST00000391113 65 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 AC004467.1-201ENST00000615678 330 ntBASIC-1.45□□□□□ -2.64
SPTSSBQ8NFR3 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 SNORD11-201ENST00000459124 84 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 MIR2681-201ENST00000581814 105 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 AC245884.10-201ENST00000597355 337 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 MIR6717-201ENST00000622747 73 ntBASIC-1.46□□□□□ -2.64
SPTSSBQ8NFR3 SNORD114-29-201ENST00000364819 70 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 MIR539-201ENST00000365690 78 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-38P-201ENST00000384085 107 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 MTND2P9-201ENST00000422293 931 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 AL033528.1-201ENST00000453780 140 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 MTND1P11-201ENST00000456661 876 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 AC127455.1-201ENST00000565496 145 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 AC060780.3-201ENST00000589464 80 ntBASIC-1.47□□□□□ -2.64
SPTSSBQ8NFR3 RNU4-16P-201ENST00000364737 141 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-597P-201ENST00000365620 102 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 MIR517A-201ENST00000385001 87 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 MT-TY-201ENST00000387409 66 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 AC074085.1-201ENST00000413598 418 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 MTATP6P13-201ENST00000438531 667 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 SNORD38.3-201ENST00000516599 73 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 AC055872.1-201ENST00000570978 278 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 AC018638.8-201ENST00000588755 281 ntBASIC-1.48□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 SNORD115-28-201ENST00000363931 81 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-318P-201ENST00000384283 103 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-95P-201ENST00000384697 107 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU7-96P-201ENST00000459535 64 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-531P-201ENST00000516694 104 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-86P-201ENST00000606534 107 ntBASIC-1.49□□□□□ -2.65
SPTSSBQ8NFR3 RNU4-58P-201ENST00000363192 141 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 RNU4-50P-201ENST00000364361 141 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 SNORD115-44-201ENST00000365391 82 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-906P-201ENST00000384700 70 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 SNORA40.3-201ENST00000390964 122 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 BX295541.1-201ENST00000417774 250 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 snoU13.11-201ENST00000459219 104 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-998P-201ENST00000515894 101 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-436P-201ENST00000516171 114 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 SNORA18.6-201ENST00000516792 115 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 AL157392.4-201ENST00000609756 345 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 uc_338.10-201ENST00000621872 182 ntBASIC-1.5□□□□□ -2.65
SPTSSBQ8NFR3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-879P-201ENST00000364328 108 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-596P-201ENST00000365395 98 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-901P-201ENST00000384593 106 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-297P-201ENST00000384636 107 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 AC022441.3-201ENST00000605737 136 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 AL354950.2-201ENST00000617939 290 ntBASIC-1.51□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 RNU1-141P-201ENST00000364623 158 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-248P-201ENST00000410720 107 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 FCF1P4-201ENST00000448326 183 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 SNORD42A-201ENST00000459584 64 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 SCARNA1-201ENST00000517138 166 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 MIR4473-201ENST00000583731 91 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 AL021368.1-201ENST00000607490 540 ntBASIC-1.52□□□□□ -2.65
SPTSSBQ8NFR3 RNU4-20P-201ENST00000365601 151 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 MIR587-201ENST00000384845 96 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 RNU7-115P-201ENST00000516433 55 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms