Protein–RNA interactions for Protein: Q05952

TNP2, Nuclear transition protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNP2Q05952 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
TNP2Q05952 Y_RNA.565-201ENST00000384719 101 ntBASIC2.54□□□□□ -2
TNP2Q05952 MIR218-2-201ENST00000385006 110 ntBASIC2.54□□□□□ -2
TNP2Q05952 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
TNP2Q05952 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
TNP2Q05952 AC141846.1-201ENST00000568348 142 ntBASIC2.54□□□□□ -2
TNP2Q05952 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
TNP2Q05952 MIR7975-201ENST00000619350 68 ntBASIC2.54□□□□□ -2
TNP2Q05952 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNP2Q05952 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TNP2Q05952 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.54□□□□□ -2
TNP2Q05952 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TNP2Q05952 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TNP2Q05952 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.53□□□□□ -2
TNP2Q05952 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TNP2Q05952 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TNP2Q05952 AC093831.2-201ENST00000624393 3427 ntBASIC2.53□□□□□ -2
TNP2Q05952 RNU6-315P-201ENST00000362666 107 ntBASIC2.53□□□□□ -2
TNP2Q05952 AC019129.1-201ENST00000403786 261 ntBASIC2.53□□□□□ -2
TNP2Q05952 SNORA11.2-201ENST00000408318 127 ntBASIC2.53□□□□□ -2
TNP2Q05952 AC027119.1-201ENST00000440877 241 ntBASIC2.53□□□□□ -2
TNP2Q05952 RNU7-153P-201ENST00000516455 62 ntBASIC2.53□□□□□ -2
TNP2Q05952 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.53□□□□□ -2
TNP2Q05952 MIR5187-201ENST00000583479 76 ntBASIC2.53□□□□□ -2
TNP2Q05952 AP000753.3-201ENST00000604083 169 ntBASIC2.53□□□□□ -2
TNP2Q05952 U7.4-201ENST00000614961 63 ntBASIC2.53□□□□□ -2
TNP2Q05952 AL591424.2-201ENST00000617023 128 ntBASIC2.53□□□□□ -2
TNP2Q05952 MIR8066-201ENST00000617280 78 ntBASIC2.53□□□□□ -2
TNP2Q05952 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TNP2Q05952 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
TNP2Q05952 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.53□□□□□ -2.01
TNP2Q05952 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
TNP2Q05952 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TNP2Q05952 RNU6-1123P-201ENST00000362347 106 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 RNU6-129P-201ENST00000391022 107 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 AL138878.1-201ENST00000405131 347 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 AC087499.7-201ENST00000441958 109 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 RN7SL93P-201ENST00000463035 293 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 SNORA25.13-201ENST00000516395 103 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.52□□□□□ -2.01
TNP2Q05952 AC244205.2-202ENST00000635781 342 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 AL021368.2-201ENST00000606125 5352 ntBASIC2.52□□□□□ -2.01
TNP2Q05952 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.52□□□□□ -2.01
TNP2Q05952 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.52□□□□□ -2.01
TNP2Q05952 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNP2Q05952 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TNP2Q05952 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
TNP2Q05952 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TNP2Q05952 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TNP2Q05952 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TNP2Q05952 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TNP2Q05952 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
TNP2Q05952 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNP2Q05952 RNA5SP133-201ENST00000363368 119 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 RNY1P2-201ENST00000364820 117 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 RNU6-360P-201ENST00000390944 104 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 AC083863.1-201ENST00000438811 231 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 BX510359.1-201ENST00000456973 237 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.51□□□□□ -2.01
TNP2Q05952 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TNP2Q05952 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNP2Q05952 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNP2Q05952 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNP2Q05952 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.51□□□□□ -2.01
TNP2Q05952 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNP2Q05952 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TNP2Q05952 RHEBP3-201ENST00000411920 351 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 SNORD4B-201ENST00000459083 72 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 RNU7-170P-201ENST00000459303 61 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 RNU6-322P-201ENST00000516010 103 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 RNA5SP164-201ENST00000516533 110 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 AL662814.1-201ENST00000617364 121 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 SNORA50A-202ENST00000629536 136 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 LINC02471-203ENST00000641941 4752 ntBASIC2.5□□□□□ -2.01
TNP2Q05952 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNP2Q05952 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
TNP2Q05952 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TNP2Q05952 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TNP2Q05952 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TNP2Q05952 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TNP2Q05952 RNU4-32P-201ENST00000363404 141 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 RNA5SP50-201ENST00000363731 107 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 MIR490-201ENST00000384865 128 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 MIR199A2-201ENST00000385289 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 NDUFB4P4-201ENST00000404822 243 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 RNA5SP100-201ENST00000410903 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 RNA5SP59-201ENST00000410922 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 ATP5A1P2-201ENST00000412323 255 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 MIR5047-201ENST00000579212 100 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 MIR4658-201ENST00000584344 65 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.49□□□□□ -2.01
TNP2Q05952 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
TNP2Q05952 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 274 ms