Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNU6-693P-201ENST00000516134 107 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-469P-201ENST00000516253 101 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-479P-201ENST00000516348 105 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU7-13P-201ENST00000516413 62 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-107P-201ENST00000516643 102 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-612P-201ENST00000516909 102 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR4464-201ENST00000580818 92 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR4423-201ENST00000580922 80 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AC021443.1-201ENST00000604478 211 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AL357078.3-201ENST00000607528 618 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR664B-201ENST00000626756 61 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.45□□□□□ -2.48
ABCA4P78363 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-873P-201ENST00000363833 107 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-740P-201ENST00000364734 105 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 SNORA27-201ENST00000384323 126 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR626-201ENST00000385032 94 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 SNORD70.1-201ENST00000391007 85 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-903P-201ENST00000391270 109 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR548O-201ENST00000408583 114 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU2-9P-201ENST00000410194 145 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU4-83P-201ENST00000410863 133 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.45□□□□□ -2.48
ABCA4P78363 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.45□□□□□ -2.48
ABCA4P78363 AC236972.2-201ENST00000434979 310 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AC097635.1-201ENST00000450678 155 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AL500527.2-201ENST00000454105 95 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU7-88P-201ENST00000458752 63 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 SNORD2-201ENST00000459163 69 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU7-45P-201ENST00000459460 63 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNA5SP54-201ENST00000516951 92 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU2-31P-201ENST00000516954 155 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 RNU6-323P-201ENST00000521915 107 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AC127455.1-201ENST00000565496 145 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR5591-201ENST00000578248 65 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR3165-201ENST00000579874 75 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR548AG2-201ENST00000581228 64 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR6502-201ENST00000617296 76 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 AC009248.2-201ENST00000619826 254 ntBASIC-0.45□□□□□ -2.48
ABCA4P78363 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.45□□□□□ -2.48
ABCA4P78363 MIR101-2-201ENST00000362195 79 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 MIR148A-201ENST00000362215 68 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 MIR410-201ENST00000362222 80 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 SNORD114-7-201ENST00000362520 77 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 SNORD116.1-201ENST00000365628 92 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 SNORA72.6-201ENST00000384520 129 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 MIR588-201ENST00000384900 83 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 MIR8485-201ENST00000401372 91 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 RNU2-14P-201ENST00000411053 191 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.46□□□□□ -2.48
ABCA4P78363 AL161932.1-201ENST00000437408 146 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 AC112204.1-201ENST00000502591 103 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 TRAJ51-201ENST00000504127 63 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.46□□□□□ -2.48
ABCA4P78363 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 RNU6-453P-201ENST00000516819 85 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 AC068339.1-201ENST00000526965 141 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.46□□□□□ -2.48
ABCA4P78363 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 MIR6773-201ENST00000612812 74 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.46□□□□□ -2.48
ABCA4P78363 RNU6-403P-201ENST00000363163 104 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 SNORD115-16-201ENST00000363887 82 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU4-20P-201ENST00000365601 151 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 SNORA51.5-201ENST00000384126 131 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNY3P4-201ENST00000384428 101 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 MIR206-201ENST00000384872 86 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 MIR1-2-201ENST00000384961 85 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 MIR450B-201ENST00000401182 78 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU6-855P-201ENST00000410395 104 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNA5SP494-201ENST00000410653 129 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.47□□□□□ -2.48
ABCA4P78363 SNORD11-201ENST00000459124 84 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RPS29P24-201ENST00000486345 171 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU2-13P-201ENST00000515909 113 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 PART1_1.1-201ENST00000611761 217 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 MTND1P7-201ENST00000632801 297 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 MIR342-201ENST00000362212 99 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 SNORA63C-201ENST00000364578 129 ntBASIC-0.47□□□□□ -2.48
ABCA4P78363 RNU6-900P-201ENST00000384498 102 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms