Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 IGKV3-31-201ENST00000523109 329 ntBASIC1.58□□□□□ -2.16
ERVFC1-1P60608 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ERVFC1-1P60608 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ERVFC1-1P60608 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.547-201ENST00000384654 119 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 MIR802-201ENST00000390235 94 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 U8.16-201ENST00000391279 133 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 Z98742.3-201ENST00000418637 326 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 CALM2P4-201ENST00000430810 426 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
ERVFC1-1P60608 snoU13.26-201ENST00000459452 105 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.57□□□□□ -2.16
ERVFC1-1P60608 RNA5SP281-201ENST00000516504 135 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 SCARNA16.3-201ENST00000516595 184 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.692-201ENST00000516627 105 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 SCARNA15-202ENST00000516881 127 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 MIR1273D-201ENST00000577266 86 ntBASIC1.57□□□□□ -2.16
ERVFC1-1P60608 ICE2P2-201ENST00000483823 2787 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.114-201ENST00000363265 113 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.336-201ENST00000365307 109 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 RNU6-424P-201ENST00000384367 105 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.563-201ENST00000384707 108 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.629-201ENST00000411368 105 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.56□□□□□ -2.16
ERVFC1-1P60608 AL158147.1-201ENST00000443970 75 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.712-201ENST00000517011 92 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.757-201ENST00000578934 114 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 MIR4648-201ENST00000580107 72 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 SNORA28-201ENST00000606769 126 ntBASIC1.56□□□□□ -2.16
ERVFC1-1P60608 AL442644.1-201ENST00000454390 3105 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNU6-163P-201ENST00000384396 106 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNU6-1031P-201ENST00000384773 107 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 MIR504-201ENST00000385065 83 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RN7SKP223-201ENST00000410582 62 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNU6-938P-201ENST00000411285 103 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AL445685.2-201ENST00000422551 342 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 CYCTP-201ENST00000504253 315 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNU6-772P-201ENST00000516042 105 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNA5SP168-201ENST00000516642 112 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 RNU6-1149P-201ENST00000516810 97 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 MIR5197-201ENST00000583721 112 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AL359881.1-201ENST00000602916 267 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AL022345.2-201ENST00000606307 135 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AC027279.3-201ENST00000625055 122 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 AC008555.8-201ENST00000623602 2168 ntBASIC1.55□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.37-201ENST00000362606 108 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.273-201ENST00000364703 102 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.353-201ENST00000365440 108 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 SNORD18B-201ENST00000365659 72 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ERVFC1-1P60608 SNORA40.5-201ENST00000391061 128 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 AL034345.1-201ENST00000407768 123 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.630-201ENST00000411370 108 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 HMGN2P32-201ENST00000444648 269 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 AC099513.1-201ENST00000490423 301 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 SNORD36C-201ENST00000516733 66 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 IGKV1-22-201ENST00000524313 326 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 AC108081.1-201ENST00000604358 221 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 AL773524.1-201ENST00000614065 229 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 AC134878.1-201ENST00000619901 243 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
ERVFC1-1P60608 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
ERVFC1-1P60608 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.54□□□□□ -2.16
ERVFC1-1P60608 SNORD115-28-201ENST00000363931 81 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.410-201ENST00000383992 113 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 SNORD20-201ENST00000384550 80 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 Y_RNA.617-201ENST00000410920 90 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.53□□□□□ -2.16
ERVFC1-1P60608 AL445646.1-201ENST00000431784 216 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 RPL23AP6-201ENST00000446637 472 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 RNU5E-3P-201ENST00000515913 68 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 RN7SKP179-201ENST00000516126 217 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 AC021506.2-201ENST00000612354 169 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 AC015726.2-201ENST00000620112 122 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 MIR3914-2-201ENST00000637339 95 ntBASIC1.53□□□□□ -2.16
ERVFC1-1P60608 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 RNU6-215P-201ENST00000365169 102 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 RNU6-1189P-201ENST00000383958 107 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 RNU6-950P-201ENST00000384651 107 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 RNU2-7P-201ENST00000410794 178 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 RNU6-781P-201ENST00000516377 101 ntBASIC1.52□□□□□ -2.17
ERVFC1-1P60608 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ERVFC1-1P60608 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.52□□□□□ -2.17
ERVFC1-1P60608 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms