Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 SNORA48.1-201ENST00000390879 135 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RNA5SP501-201ENST00000410990 112 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RNU6-938P-201ENST00000411285 103 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 SNX2P2-201ENST00000424553 323 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RNU7-12P-201ENST00000516030 62 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RNA5SP168-201ENST00000516642 112 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 SNORA31.15-201ENST00000516771 132 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 AC027279.3-201ENST00000625055 122 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 Y_RNA.351-201ENST00000365436 96 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 Y_RNA.440-201ENST00000384120 114 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 RNU6-424P-201ENST00000384367 105 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 RNU6-880P-201ENST00000384526 107 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SLC6A11P48066 RNU6-482P-201ENST00000391068 107 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
SLC6A11P48066 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
SLC6A11P48066 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SLC6A11P48066 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A11P48066 AL596211.1-201ENST00000569873 2277 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 SNORD114-1-201ENST00000362705 72 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 Y_RNA.241-201ENST00000364470 117 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 RNU6-1031P-201ENST00000384773 107 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 AC015922.2-201ENST00000435593 184 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 AC087499.4-201ENST00000448505 178 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 AC002984.1-201ENST00000591692 448 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
SLC6A11P48066 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC6A11P48066 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SLC6A11P48066 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A11P48066 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A11P48066 MIR516B2-201ENST00000385190 85 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 MIR764-201ENST00000390811 85 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 RNA5SP136-201ENST00000410906 107 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 AC063976.4-201ENST00000421971 163 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 Y_RNA.676-201ENST00000516393 96 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC6A11P48066 MIR4709-201ENST00000577272 72 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.28□□□□□ -2.04
SLC6A11P48066 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC6A11P48066 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 RNY1P6-201ENST00000384193 109 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC6A11P48066 AC093850.1-201ENST00000454121 251 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 RNU7-80P-201ENST00000459562 61 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 RPS26P48-201ENST00000491713 339 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 AC015712.3-201ENST00000559380 164 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 AC021443.1-201ENST00000604478 211 ntBASIC2.27□□□□□ -2.05
SLC6A11P48066 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SLC6A11P48066 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A11P48066 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A11P48066 RNU6-833P-201ENST00000363486 107 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 RNU6-112P-201ENST00000363599 104 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 U8.17-201ENST00000391292 132 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 AL591806.2-201ENST00000433122 173 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 RNY4P20-201ENST00000516678 93 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 RNU7-181P-201ENST00000517234 74 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 AL049779.4-201ENST00000604500 156 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 AC245884.12-201ENST00000615364 59 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 AC091932.4-201ENST00000623386 200 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A11P48066 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A11P48066 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
SLC6A11P48066 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC6A11P48066 AP000648.3-201ENST00000623539 4507 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC6A11P48066 RNU6-349P-201ENST00000362402 107 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 RNU4-16P-201ENST00000364737 141 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 Y_RNA.454-201ENST00000384224 113 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 SNORA27-201ENST00000384323 126 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 MIR570-201ENST00000384917 97 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.25□□□□□ -2.05
SLC6A11P48066 snoU13.27-201ENST00000459278 104 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 COX6CP6-201ENST00000490840 228 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 SCARNA16.3-201ENST00000516595 184 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 AC090821.2-201ENST00000523552 176 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 AC021506.2-201ENST00000612354 169 ntBASIC2.25□□□□□ -2.05
SLC6A11P48066 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC6A11P48066 RNU6-755P-201ENST00000364400 103 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 RNU6-296P-201ENST00000384608 107 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 AL627390.1-201ENST00000396055 340 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 MIR1267-201ENST00000408723 78 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC6A11P48066 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 RNU6-548P-201ENST00000517083 115 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 MIR4778-201ENST00000577635 80 ntBASIC2.24□□□□□ -2.05
SLC6A11P48066 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC6A11P48066 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SLC6A11P48066 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.23□□□□□ -2.05
SLC6A11P48066 MIR452-201ENST00000385020 85 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 RNU7-164P-201ENST00000459221 62 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 RNA5SP481-201ENST00000516814 122 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms