Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SNORD115-6-201ENST00000363942 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-42-201ENST00000364273 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 Y_RNA.251-201ENST00000364551 99 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-15-201ENST00000364809 81 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-1-201ENST00000364961 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-26-201ENST00000365067 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-10-201ENST00000365073 81 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-43-201ENST00000365503 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-36-201ENST00000365629 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 Y_RNA.412-201ENST00000384001 104 ntBASIC0.01□□□□□ -2.41
RFC3P40938 Y_RNA.547-201ENST00000384654 119 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD38B-201ENST00000384690 67 ntBASIC0.01□□□□□ -2.41
RFC3P40938 RNU7-67P-201ENST00000459003 62 ntBASIC0.01□□□□□ -2.41
RFC3P40938 RNU7-25P-201ENST00000516544 62 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD92-201ENST00000585078 85 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-40-201ENST00000606510 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD38B-202ENST00000625943 69 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
RFC3P40938 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0□□□□□ -2.41
RFC3P40938 AL589823.1-201ENST00000429577 183 ntBASIC0□□□□□ -2.41
RFC3P40938 RNU7-73P-201ENST00000458743 63 ntBASIC0□□□□□ -2.41
RFC3P40938 RNU7-185P-201ENST00000459215 60 ntBASIC0□□□□□ -2.41
RFC3P40938 RNU7-141P-201ENST00000459304 62 ntBASIC0□□□□□ -2.41
RFC3P40938 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
RFC3P40938 MIR3678-201ENST00000578455 94 ntBASIC0□□□□□ -2.41
RFC3P40938 VN1R91P-201ENST00000594377 169 ntBASIC0□□□□□ -2.41
RFC3P40938 Z97988.1-201ENST00000637697 135 ntBASIC0□□□□□ -2.41
RFC3P40938 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 RNU6-845P-201ENST00000362578 103 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 RNU6-490P-201ENST00000362985 107 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 SNORA72.4-201ENST00000384174 132 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 RNU7-156P-201ENST00000517214 74 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 AC006600.1-201ENST00000572529 153 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 AC005357.1-201ENST00000588399 301 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 AC011373.1-201ENST00000607270 237 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 AC022306.2-201ENST00000617563 647 ntBASIC-0.01□□□□□ -2.41
RFC3P40938 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 RNA5SP117-201ENST00000365294 118 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 SNORD116-4-201ENST00000384733 96 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 MIR1257-201ENST00000408490 117 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 MIR548O-201ENST00000408583 114 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 MIR3145-201ENST00000580727 82 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 MIR8055-201ENST00000610739 97 ntBASIC-0.02□□□□□ -2.41
RFC3P40938 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.02□□□□□ -2.41
RFC3P40938 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 MIR588-201ENST00000384900 83 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 MIR518F-201ENST00000384973 87 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 MIR559-201ENST00000385188 96 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 AC096644.2-201ENST00000429278 159 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 MTATP6P26-201ENST00000445926 662 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 RNU7-110P-201ENST00000516891 62 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 RNU6-958P-201ENST00000516995 106 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 RNU6-448P-201ENST00000517052 107 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 AP000942.4-201ENST00000604811 241 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
RFC3P40938 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 SNORD63-201ENST00000384262 68 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 RNU6-913P-201ENST00000390913 95 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 RNU2-14P-201ENST00000411053 191 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 AC087499.4-201ENST00000448505 178 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 snoU13.2-201ENST00000459201 104 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 AC084782.3-201ENST00000612282 578 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 AC025253.1-201ENST00000613623 543 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 AC133104.2-201ENST00000615272 193 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 AC022140.2-201ENST00000623500 188 ntBASIC-0.04□□□□□ -2.42
RFC3P40938 RNA5SP214-201ENST00000363378 118 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 SNORA72.1-201ENST00000363485 129 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 RNU6-801P-201ENST00000364087 105 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 MIR563-201ENST00000385080 79 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 RNU2-59P-201ENST00000410482 191 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 PDCL2P1-201ENST00000419302 352 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 AC023449.1-201ENST00000454464 154 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 AC133485.4-201ENST00000561835 220 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.05□□□□□ -2.42
RFC3P40938 SNORA36.1-201ENST00000363424 132 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 MTND1P34-201ENST00000438556 671 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 RNU7-53P-201ENST00000516705 60 ntBASIC-0.06□□□□□ -2.42
RFC3P40938 RNU7-149P-201ENST00000516739 59 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms