Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR522-201ENST00000385071 87 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 RNU7-26P-201ENST00000458980 63 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 AL359821.1-201ENST00000605519 182 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
GRIN3BO60391 U8.5-201ENST00000364528 136 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 Y_RNA.323-201ENST00000365157 109 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 MIR583-201ENST00000384846 75 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 MIR590-201ENST00000385008 97 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 MIR891A-201ENST00000401237 79 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 RNA5SP127-201ENST00000411051 133 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.8□□□□□ -1.96
GRIN3BO60391 RNA5SP236-201ENST00000516169 116 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 RNU6-412P-201ENST00000516434 106 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 MIR3126-201ENST00000577443 74 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 AC022217.4-201ENST00000604389 163 ntBASIC2.8□□□□□ -1.96
GRIN3BO60391 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
GRIN3BO60391 RNU6-888P-201ENST00000363010 101 ntBASIC2.79□□□□□ -1.96
GRIN3BO60391 MIR1263-201ENST00000408324 86 ntBASIC2.79□□□□□ -1.96
GRIN3BO60391 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.79□□□□□ -1.96
GRIN3BO60391 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.79□□□□□ -1.96
GRIN3BO60391 RPL39P34-201ENST00000477141 156 ntBASIC2.79□□□□□ -1.96
GRIN3BO60391 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.79□□□□□ -1.96
GRIN3BO60391 RNU7-28P-201ENST00000516759 62 ntBASIC2.79□□□□□ -1.96
GRIN3BO60391 ZNF720P1-201ENST00000562403 1939 ntBASIC2.79□□□□□ -1.96
GRIN3BO60391 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
GRIN3BO60391 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GRIN3BO60391 MIR494-201ENST00000349529 81 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 RNU6-820P-201ENST00000384273 107 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 MIR570-201ENST00000384917 97 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 MIR450A2-201ENST00000385022 100 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 SNORA17.3-201ENST00000391159 129 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 AC019129.1-201ENST00000403786 261 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 SNORA18.4-201ENST00000516440 124 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 RNU6-521P-201ENST00000516663 105 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 AC022202.1-201ENST00000613515 211 ntBASIC2.78□□□□□ -1.96
GRIN3BO60391 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GRIN3BO60391 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 Y_RNA.221-201ENST00000364248 96 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 RNU6-1292P-201ENST00000383856 107 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 Y_RNA.528-201ENST00000384575 108 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 MIR221-201ENST00000385135 110 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 RNA5SP482-201ENST00000391269 118 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 AL023284.1-201ENST00000403956 276 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 Y_RNA.593-201ENST00000410292 98 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 BTF3P4-201ENST00000418852 495 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 AL021397.1-201ENST00000451806 248 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 RNU1-104P-201ENST00000517280 175 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 AC069114.2-201ENST00000604699 304 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 MALAT1.1-201ENST00000618249 95 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
GRIN3BO60391 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
GRIN3BO60391 ZNF355P-201ENST00000427301 3216 ntBASIC2.77□□□□□ -1.97
GRIN3BO60391 SNORD115-3-201ENST00000363100 82 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 RNU6-1019P-201ENST00000364424 107 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 SNORD61-201ENST00000384252 73 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
GRIN3BO60391 RNA5SP210-201ENST00000391034 120 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 MIR1302-5-201ENST00000408164 150 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 AC245047.3-201ENST00000429428 127 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 AL445646.1-201ENST00000431784 216 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 MTATP8P2-201ENST00000435212 202 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 FAM71BP1-201ENST00000604431 523 ntBASIC2.76□□□□□ -1.97
GRIN3BO60391 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.76□□□□□ -1.97
GRIN3BO60391 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
GRIN3BO60391 Y_RNA.107-201ENST00000363190 121 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 Y_RNA.342-201ENST00000365352 113 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 RNU6-1124P-201ENST00000384169 107 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 Y_RNA.544-201ENST00000384650 113 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 BX510359.4-201ENST00000423750 193 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 AC069257.2-201ENST00000441819 155 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 AL606517.2-201ENST00000442855 241 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 RNA5SP182-201ENST00000516064 82 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 RNU6-158P-201ENST00000517104 100 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.75□□□□□ -1.97
GRIN3BO60391 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.75□□□□□ -1.97
GRIN3BO60391 SNORD18B-201ENST00000365659 72 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 RNU6-787P-201ENST00000384032 107 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 SNORA1-201ENST00000384107 130 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 MT-TI-201ENST00000387365 69 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 SNRPGP13-201ENST00000442212 177 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.74□□□□□ -1.97
GRIN3BO60391 RNU6-970P-201ENST00000516312 107 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
GRIN3BO60391 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GRIN3BO60391 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GRIN3BO60391 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
GRIN3BO60391 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
GRIN3BO60391 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
GRIN3BO60391 SNORD68-201ENST00000363214 84 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 SNORA63.5-201ENST00000363548 123 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 Y_RNA.224-201ENST00000364308 111 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 MIR548A2-201ENST00000384956 97 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 RNA5SP465-201ENST00000391195 109 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 MIR1255A-201ENST00000408338 113 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 Y_RNA.666-201ENST00000516187 112 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 AC084364.2-201ENST00000546924 395 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms