Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MIR3126-201ENST00000577443 74 ntBASIC3.16□□□□□ -1.9
PCDHB9Q9Y5E1 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
PCDHB9Q9Y5E1 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
PCDHB9Q9Y5E1 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
PCDHB9Q9Y5E1 MIR1255B1-201ENST00000636325 63 ntBASIC3.16□□□□□ -1.9
PCDHB9Q9Y5E1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHB9Q9Y5E1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHB9Q9Y5E1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHB9Q9Y5E1 SNORA1.2-201ENST00000365189 134 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 RN7SL442P-201ENST00000473804 320 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 UBL5P3-201ENST00000475112 231 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP137-201ENST00000516833 135 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 MIR4694-201ENST00000578534 80 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 FAM71BP1-201ENST00000604431 523 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 Y_RNA.773-201ENST00000607168 90 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 MIR6715A-201ENST00000615929 79 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 MIR203B-201ENST00000636080 86 ntBASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB9Q9Y5E1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 Y_RNA.10-201ENST00000362371 110 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNU1-91P-201ENST00000364746 163 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 MIR597-201ENST00000384968 97 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-893P-201ENST00000458841 100 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP57-201ENST00000459463 123 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 AC008885.1-201ENST00000514930 301 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNU7-12P-201ENST00000516030 62 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RN7SKP12-201ENST00000516275 143 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 AL513534.2-201ENST00000603836 250 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB9Q9Y5E1 SNORA4.2-201ENST00000365313 147 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 Y_RNA.360-201ENST00000365512 102 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-1031P-201ENST00000384773 107 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 MIR452-201ENST00000385020 85 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 MIR450A2-201ENST00000385022 100 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-1319P-201ENST00000390855 104 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-747P-201ENST00000390928 104 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU11-3P-201ENST00000391111 133 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-241P-201ENST00000391148 104 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-733P-201ENST00000410759 104 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-177P-201ENST00000411257 104 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU7-45P-201ENST00000459460 63 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDHB9Q9Y5E1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP383-201ENST00000362934 120 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 Y_RNA.155-201ENST00000363632 101 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 Y_RNA.171-201ENST00000363760 102 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNU4-67P-201ENST00000364569 141 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP173-201ENST00000364857 136 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 SNORA70.7-201ENST00000384159 133 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-820P-201ENST00000384273 107 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 MIR577-201ENST00000385196 96 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 MIR1283-2-201ENST00000408621 87 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNU4-69P-201ENST00000410677 143 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 PGBD4P5-201ENST00000445958 426 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 RNU7-113P-201ENST00000459273 62 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 AC026421.1-201ENST00000519101 163 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB9Q9Y5E1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 SNORD115-2-201ENST00000362842 82 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-832P-201ENST00000363319 107 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 SNORD115-20-201ENST00000365099 82 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-409P-201ENST00000384114 104 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 MIR516B2-201ENST00000385190 85 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 RNU7-26P-201ENST00000458980 63 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 RNU6-1258P-201ENST00000516911 111 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 AP003327.1-201ENST00000529684 127 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 MIR4435-1-201ENST00000582552 80 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 ELOCP29-201ENST00000588193 334 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 AC103810.6-201ENST00000606708 136 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 MIR6841-201ENST00000637129 72 ntBASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB9Q9Y5E1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms