Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-163P-201ENST00000384396 106 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 PCNPP3-201ENST00000393579 471 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AC093850.1-201ENST00000454121 251 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.662-201ENST00000516028 97 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD77.4-201ENST00000516158 81 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD45.4-201ENST00000516629 73 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AC008507.4-201ENST00000585464 127 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AC120024.3-201ENST00000603167 156 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-484P-201ENST00000384016 107 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 RNY3P5-201ENST00000384127 102 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-886P-201ENST00000384319 105 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.486-201ENST00000384398 107 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 MIR15B-201ENST00000385045 98 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 SEPT7P4-201ENST00000437076 306 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 HMGN2P23-201ENST00000456759 269 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 RNU7-12P-201ENST00000516030 62 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 MIR4778-201ENST00000577635 80 ntBASIC1.55□□□□□ -2.16
SMARCAL1Q9NZC9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-209P-201ENST00000384118 107 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 MIR548I3-201ENST00000408378 149 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 MIR548I1-201ENST00000408810 149 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.54□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-414P-201ENST00000363705 104 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 AL603825.1-201ENST00000438481 80 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 CYCTP-201ENST00000504253 315 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 SNORD14E-201ENST00000364009 85 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-312P-201ENST00000364629 107 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 MIR194-1-201ENST00000384892 85 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 MIR802-201ENST00000390235 94 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 RNU2-70P-201ENST00000410718 179 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 AC006461.1-201ENST00000412637 326 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 MIR4431-201ENST00000579990 94 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 AC087685.1-201ENST00000587507 141 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 AC104465.1-201ENST00000611365 139 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
SMARCAL1Q9NZC9 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-442P-201ENST00000383968 104 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 MIR891A-201ENST00000401237 79 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 RNU2-55P-201ENST00000411146 174 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 AC027279.3-201ENST00000625055 122 ntBASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.51□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-268P-201ENST00000364174 107 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-643P-201ENST00000384018 107 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 MIR1267-201ENST00000408723 78 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU4-43P-201ENST00000410628 137 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-197P-201ENST00000516680 100 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 MIR4662B-201ENST00000579498 81 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 AC106754.2-201ENST00000623006 233 ntBASIC1.5□□□□□ -2.17
SMARCAL1Q9NZC9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms